RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 ARL8BQ9NVJ2 186 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 TAS2R1Q9NYW7 299 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 ZNF180Q9UJW8 692 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 AJAP1Q9UKB5 411 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-202ENST00000339438 CNTNAP5Q8WYK1 1306 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 TSPY2A6NKD2 308 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 C2CD2LO14523 706 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 PCP11498 1178 aaKnown RBP5.9□□□□□ -1.46
CSDE1-202ENST00000339438 CPA3P15088 417 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 MARSP56192 900 aaKnown RBP5.9□□□□□ -1.46
CSDE1-202ENST00000339438 DHX34Q14147 1143 aaKnown RBP5.9□□□□□ -1.46
CSDE1-202ENST00000339438 ZNF449Q6P9G9 518 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 IZUMO2Q6UXV1 221 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 RAPH1Q70E73 1250 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 ZC3H3Q8IXZ2 948 aaKnown RBP5.9□□□□□ -1.46
CSDE1-202ENST00000339438 NUP93Q8N1F7 819 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 PDCD7Q8N8D1 485 aaKnown RBP5.9□□□□□ -1.46
CSDE1-202ENST00000339438 ZFP28Q8NHY6 868 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 SLC30A5Q8TAD4 765 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 SNRNP27Q8WVK2 155 aaKnown RBP5.9□□□□□ -1.46
CSDE1-202ENST00000339438 MAML1Q92585 1016 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 ABHD8Q96I13 439 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 CDC42EP4Q9H3Q1 356 aaKnown RBP5.9□□□□□ -1.46
CSDE1-202ENST00000339438 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.9□□□□□ -1.46
CSDE1-202ENST00000339438 FAM32AQ9Y421 112 aaKnown RBP5.9□□□□□ -1.46
CSDE1-202ENST00000339438 IGSF9BQ9UPX0 1349 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 EIF3FO00303 357 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-202ENST00000339438 ADAMTS4O75173 837 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 GSTT2P0CG29 244 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 GSTT2BP0CG30 244 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 ANPEPP15144 967 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 ZFXP17010 805 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-202ENST00000339438 IVDP26440 423 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 SERPINB3P29508 390 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 MCM7P33993 719 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 DSG1Q02413 1049 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 SH2D4BQ5SQS7 431 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 TCERG1LQ5VWI1 586 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 SPTY2D1Q68D10 685 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-202ENST00000339438 CROCCP2Q86T23 111 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.9□□□□□ -1.463e-12■□□□□ 9.4
CSDE1-202ENST00000339438 FBXO27Q8NI29 283 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 DTX3LQ8TDB6 740 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 PCMTD1Q96MG8 357 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-202ENST00000339438 PPP1R10Q96QC0 940 aaKnown RBP5.9□□□□□ -1.46
CSDE1-202ENST00000339438 PANX3Q96QZ0 392 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 CCT7Q99832 543 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 PITPNM3Q9BZ71 974 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 COL20A1Q9P218 1284 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 DNAJB4Q9UDY4 337 aa5.9□□□□□ -1.46
CSDE1-202ENST00000339438 R3HDM2Q9Y2K5 976 aaKnown RBP5.9□□□□□ -1.46
CSDE1-202ENST00000339438 MANSC4A6NHS7 340 aaPredicted RBP5.9□□□□□ -1.47
CSDE1-202ENST00000339438 GNRH1P01148 92 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 PLCG2P16885 1265 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 CST5P28325 142 aaPredicted RBP5.9□□□□□ -1.47
CSDE1-202ENST00000339438 MTTPP55157 894 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 RELAQ04206 551 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 DLGAP5Q15398 846 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 TGFBIQ15582 683 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 CYP1B1Q16678 543 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 CCDC142Q17RM4 750 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 SFT2D3Q587I9 215 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 C10orf76Q5T2E6 689 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 DCLRE1AQ6PJP8 1040 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 OLFML1Q6UWY5 402 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 B3GNT6Q6ZMB0 384 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 RNF168Q8IYW5 571 aaPredicted RBP5.9□□□□□ -1.47
CSDE1-202ENST00000339438 FAM133AQ8N9E0 248 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 DQX1Q8TE96 717 aaKnown RBP5.9□□□□□ -1.47
CSDE1-202ENST00000339438 SKA1Q96BD8 255 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 CLIP3Q96DZ5 547 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 NEURL2Q9BR09 285 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 NACA2Q9H009 215 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 OSGEPQ9NPF4 335 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 LARSQ9P2J5 1176 aaKnown RBP5.9□□□□□ -1.47
CSDE1-202ENST00000339438 CROTQ9UKG9 612 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 GABRQQ9UN88 632 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.9□□□□□ -1.47
CSDE1-202ENST00000339438 FANCMQ8IYD8 2048 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 ANAPC1Q9H1A4 1944 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 F8W8V4 182 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 MAPK13O15264 365 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 MAP3K7O43318 606 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 RARBP10826 455 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 GNAT2P19087 354 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 DSG3P32926 999 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 CHKAP35790 457 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 PRKCIP41743 596 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 RXRGP48443 463 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 SLC18A1P54219 525 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 OAZ1P54368 228 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 SH3BGRP55822 239 aaPredicted RBP5.9□□□□□ -1.47
CSDE1-202ENST00000339438 JAM2P57087 298 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 PDE4DQ08499 809 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 COL19A1Q14993 1142 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 FAM110CQ1W6H9 321 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 TMEM132AQ24JP5 1023 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 HS2ST1Q7LGA3 356 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 OTOAQ7RTW8 1153 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 PHLDB2Q86SQ0 1253 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms