RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 INHBEP58166 350 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 PTPN11Q06124 597 aaPredicted RBP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 C1QBPQ07021 282 aaKnown RBP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 NFX1Q12986 1120 aaKnown RBP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 ZBTB6Q15916 424 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 SH3PXD2AQ5TCZ1 1133 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 NOTUMQ6P988 496 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 ALKAL1Q6UXT8 129 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 ACOT1Q86TX2 421 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 ERICH1Q86X53 443 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 ARFGAP1Q8N6T3 406 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 KCNV2Q8TDN2 545 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 PIK3R5Q8WYR1 880 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 TMEM176AQ96HP8 235 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 DPEP3Q9H4B8 488 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 FAM49BQ9NUQ9 324 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 PARP2Q9UGN5 583 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 SNX24Q9Y343 169 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 SMIM28A0A1B0GU29 152 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 CCDC66A2RUB6 948 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 GRAP2O75791 330 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 MICAL2O94851 1124 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 KRT14P02533 472 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 PDGFRBP09619 1106 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 PTGIRP43119 386 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 EPHB4P54760 987 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 TAF5Q15542 800 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 TRIP13Q15645 432 aaPredicted RBP7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 SMTNL2Q2TAL5 461 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 MAP9Q49MG5 647 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 KCNT1Q5JUK3 1230 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 FAM228AQ86W67 206 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 TMEM35BQ8NCS4 154 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 SMG8Q8ND04 991 aaKnown RBP7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 OR2W6PQ8NHA6 318 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 SOCS4Q8WXH5 440 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 LPPQ93052 612 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 SNX27Q96L92 541 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 PARVAQ9NVD7 372 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 VPS18Q9P253 973 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 C2CD2Q9Y426 696 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 GRIN2DO15399 1336 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 TMEM88BA6NKF7 163 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 BHMG1C9JSJ3 638 aaPredicted RBP7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 CCDC188H7C350 402 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 DUSP11O75319 330 aaKnown RBP7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 GABBR2O75899 941 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 CHRNA1P02708 482 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 PFKMP08237 780 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 MYBL1P10243 752 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 RALAP11233 206 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 MCM3P25205 808 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 CTNNA2P26232 953 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 RGS7P49802 495 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 RBP5P82980 135 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 HTRA3P83110 453 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 DR1Q01658 176 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 PPP1R26Q5T8A7 1209 aaPredicted RBP7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 LIN9Q5TKA1 542 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 DCUN1D2Q6PH85 259 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 CCDC137Q6PK04 289 aaKnown RBP7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 TRIM72Q6ZMU5 477 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 CCDC50Q8IVM0 306 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 IPPQ9Y573 584 aa7.84□□□□□ -1.15
SRFBP1-201ENST00000339397 M0QYV0 167 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 FGFR1P11362 822 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 IL1R2P27930 398 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 GPD2P43304 727 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 SREBF2Q12772 1141 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 TERF2Q15554 542 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 SOWAHAQ2M3V2 549 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 PPP1R15BQ5SWA1 713 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 SEL1L2Q5TEA6 688 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 KAZNQ674X7 775 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 TWF2Q6IBS0 349 aaKnown RBP7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 DNAJC24Q6P3W2 148 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 JAMLQ86YT9 394 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 RAPGEF5Q92565 580 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 ARL8AQ96BM9 186 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 VCPIP1Q96JH7 1222 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 ZIM3Q96PE6 472 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 B3GNT5Q9BYG0 378 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 AGO3Q9H9G7 860 aaKnown RBP7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 SAE1Q9UBE0 346 aaPredicted RBP7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 PCDHGC3Q9UN70 934 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 GOLGA6BA6NDN3 693 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 TRPA1O75762 1119 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 ASGR1P07306 291 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 HOXC8P31273 242 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 CDH5P33151 784 aaPredicted RBP7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 RPL21P46778 160 aaKnown RBP7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 RABGGTBP53611 331 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 PSMC1P62191 440 aaKnown RBP7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 UAP1Q16222 522 aaPredicted RBP7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 KCNA10Q16322 511 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 ZFYVE27Q5T4F4 411 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 C9orf57Q5W0N0 161 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 TRNP1Q6NT89 227 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 PMF1Q6P1K2 205 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 XYLT1Q86Y38 959 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms