RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 PSMC1P62191 440 aaKnown RBP14.86□□□□□ -0.03
PCDH8-201ENST00000338862 CCNG2Q16589 344 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 MFSD5Q6N075 450 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 PODNQ7Z5L7 613 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 SDCCAG8Q86SQ7 713 aaPredicted RBP14.86□□□□□ -0.03
PCDH8-201ENST00000338862 ATP11CQ8NB49 1132 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 RBM41Q96IZ5 413 aaKnown RBP14.86□□□□□ -0.03
PCDH8-201ENST00000338862 RAB6BQ9NRW1 208 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 PARVAQ9NVD7 372 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 C2CD2Q9Y426 696 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 MYH11P35749 1972 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 CCDC78A2IDD5 438 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 MCF2LO15068 1137 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 CFLARO15519 480 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 RBP3P10745 1247 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 CIITAP33076 1130 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 GEMIN4P57678 1058 aaKnown RBP14.86□□□□□ -0.03
PCDH8-201ENST00000338862 EIF3EP60228 445 aaKnown RBP14.86□□□□□ -0.03
PCDH8-201ENST00000338862 IGBP1P78318 339 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 NR1H3Q13133 447 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 FOXR2Q6PJQ5 311 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 ALYREFQ86V81 257 aaKnown RBP14.86□□□□□ -0.03
PCDH8-201ENST00000338862 PIP4K2CQ8TBX8 421 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 HELQQ8TDG4 1101 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 TRIM11Q96F44 468 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 PRR11Q96HE9 360 aaPredicted RBP14.86□□□□□ -0.03
PCDH8-201ENST00000338862 MROH7Q68CQ1 1323 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 MYH14Q7Z406 1995 aaKnown RBP14.86□□□□□ -0.03
PCDH8-201ENST00000338862 TRPA1O75762 1119 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 CYP24A1Q07973 514 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 HADHQ16836 314 aaKnown RBP14.86□□□□□ -0.03
PCDH8-201ENST00000338862 ZBTB41Q5SVQ8 909 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 COL20A1Q9P218 1284 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 TXNDC16Q9P2K2 825 aa14.86□□□□□ -0.03
PCDH8-201ENST00000338862 SMG5Q9UPR3 1016 aaKnown RBP14.86□□□□□ -0.03
PCDH8-201ENST00000338862 TRIM49D1C9J1S8 452 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 RANBP1P43487 201 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 NCOA4Q13772 614 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 ANKRD22Q5VYY1 191 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 CGB2Q6NT52 195 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 ARHGAP24Q8N264 748 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 BSNDQ8WZ55 320 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 USP6NLQ92738 828 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 NSL1Q96IY1 281 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 SH3GL3Q99963 347 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 IFT122Q9HBG6 1241 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 GPATCH2LQ9NWQ4 482 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 IRAK4Q9NWZ3 460 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 SCINQ9Y6U3 715 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 INO80B-WBP1J3KQ70 363 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 PTPN4P29074 926 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 SLC1A1P43005 524 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 RIPK1Q13546 671 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 TLDC1Q6P9B6 456 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 NUDCD3Q8IVD9 361 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 VTI1AQ96AJ9 217 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 INO80BQ9C086 356 aaPredicted RBP14.85□□□□□ -0.03
PCDH8-201ENST00000338862 NMRK1Q9NWW6 199 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 FBXO40Q9UH90 709 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 IP6K2Q9UHH9 426 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 WASF2Q9Y6W5 498 aa14.85□□□□□ -0.03
PCDH8-201ENST00000338862 DNALI1O14645 258 aaPredicted RBP14.84□□□□□ -0.03
PCDH8-201ENST00000338862 RAP1GAPP47736 663 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 FAAP100Q0VG06 881 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 PRPF39Q86UA1 669 aaKnown RBP14.84□□□□□ -0.03
PCDH8-201ENST00000338862 SPATA18Q8TC71 538 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 FAM81BQ96LP2 452 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 TTC25Q96NG3 672 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 ABL2P42684 1182 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 TUBP50607 506 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 CDH6P55285 790 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 MAMLD1Q13495 774 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 OR6B2Q6IFH4 312 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 CCNJLQ8IV13 435 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 MAGEC3Q8TD91 643 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 GMCL1Q96IK5 515 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 NLRP4Q96MN2 994 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 ZDHHC15Q96MV8 337 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 TTLL3Q9Y4R7 772 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 EDF1O60869 148 aaKnown RBP14.84□□□□□ -0.03
PCDH8-201ENST00000338862 TPBGLP0DKB5 382 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 FDX1P10109 184 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 KRT3P12035 628 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 NPR1P16066 1061 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 VHLP40337 213 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 CACNA2D1P54289 1103 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 CHI3L2Q15782 390 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 RNF43Q68DV7 783 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 NPNTQ6UXI9 565 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 ZC3H3Q8IXZ2 948 aaKnown RBP14.84□□□□□ -0.03
PCDH8-201ENST00000338862 SEPT12Q8IYM1 358 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 PSPC1Q8WXF1 523 aaKnown RBP14.84□□□□□ -0.03
PCDH8-201ENST00000338862 SLC7A3Q8WY07 619 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 ATP6V0A1Q93050 837 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 DDX27Q96GQ7 796 aaKnown RBP14.84□□□□□ -0.03
PCDH8-201ENST00000338862 FIZ1Q96SL8 496 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 DCLRE1BQ9H816 532 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 FIS1Q9Y3D6 152 aa14.84□□□□□ -0.03
PCDH8-201ENST00000338862 PEX11AO75192 247 aa14.83□□□□□ -0.03
PCDH8-201ENST00000338862 ELK3P41970 407 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms