RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 CCDC150Q8NCX0 1101 aa17.62■□□□□ 0.41
SHOX-201ENST00000334060 TMEM169Q96HH4 297 aa17.62■□□□□ 0.41
SHOX-201ENST00000334060 STXBP5LQ9Y2K9 1186 aa17.62■□□□□ 0.41
SHOX-201ENST00000334060 A8MXQ7 604 aa17.62■□□□□ 0.41
SHOX-201ENST00000334060 CCDC130P13994 396 aa17.62■□□□□ 0.41
SHOX-201ENST00000334060 SOX5P35711 763 aa17.62■□□□□ 0.41
SHOX-201ENST00000334060 CACNA2D1P54289 1103 aa17.62■□□□□ 0.41
SHOX-201ENST00000334060 INCA1Q0VD86 236 aa17.62■□□□□ 0.41
SHOX-201ENST00000334060 PPP2R2DQ66LE6 453 aa17.62■□□□□ 0.41
SHOX-201ENST00000334060 FAM43BQ6ZT52 329 aaPredicted RBP17.62■□□□□ 0.41
SHOX-201ENST00000334060 TMEM139Q8IV31 216 aa17.62■□□□□ 0.41
SHOX-201ENST00000334060 TTC9BQ8N6N2 239 aa17.62■□□□□ 0.41
SHOX-201ENST00000334060 TOP6BLQ8N6T0 577 aa17.62■□□□□ 0.41
SHOX-201ENST00000334060 LNX1Q8TBB1 728 aaPredicted RBP17.62■□□□□ 0.41
SHOX-201ENST00000334060 RIN2Q8WYP3 895 aaPredicted RBP17.62■□□□□ 0.41
SHOX-201ENST00000334060 LRCH3Q96II8 777 aa17.62■□□□□ 0.41
SHOX-201ENST00000334060 PCDHB8Q9UN66 801 aa17.62■□□□□ 0.41
SHOX-201ENST00000334060 LUC7L2Q9Y383 392 aaKnown RBP17.62■□□□□ 0.41
SHOX-201ENST00000334060 SF3B1O75533 1304 aaKnown RBP eCLIP17.62■□□□□ 0.41
SHOX-201ENST00000334060 HIDE1A8MVS5 230 aa17.61■□□□□ 0.41
SHOX-201ENST00000334060 VNN2O95498 520 aa17.61■□□□□ 0.41
SHOX-201ENST00000334060 ODC1P11926 461 aa17.61■□□□□ 0.41
SHOX-201ENST00000334060 GNL1P36915 607 aaPredicted RBP17.61■□□□□ 0.41
SHOX-201ENST00000334060 ARPP19P56211 112 aa17.61■□□□□ 0.41
SHOX-201ENST00000334060 OVOS1Q6IE37 1185 aa17.61■□□□□ 0.41
SHOX-201ENST00000334060 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.61■□□□□ 0.41
SHOX-201ENST00000334060 PPFIBP1Q86W92 1011 aa17.61■□□□□ 0.41
SHOX-201ENST00000334060 SPPL3Q8TCT6 385 aa17.61■□□□□ 0.41
SHOX-201ENST00000334060 PGLYRP2Q96PD5 576 aa17.61■□□□□ 0.41
SHOX-201ENST00000334060 KCNF1Q9H3M0 494 aa17.61■□□□□ 0.41
SHOX-201ENST00000334060 RNF216Q9NWF9 866 aaPredicted RBP17.61■□□□□ 0.41
SHOX-201ENST00000334060 ARHGAP20Q9P2F6 1191 aa17.61■□□□□ 0.41
SHOX-201ENST00000334060 FBXL5Q9UKA1 691 aa17.61■□□□□ 0.41
SHOX-201ENST00000334060 GTF3C4Q9UKN8 822 aa17.61■□□□□ 0.41
SHOX-201ENST00000334060 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.61■□□□□ 0.41
SHOX-201ENST00000334060 MYO9BQ13459 2157 aa17.6■□□□□ 0.41
SHOX-201ENST00000334060 A0A1W2PQJ5 194 aa17.6■□□□□ 0.41
SHOX-201ENST00000334060 AKR1B15C9JRZ8 316 aaPredicted RBP17.6■□□□□ 0.41
SHOX-201ENST00000334060 TACC1O75410 805 aa17.6■□□□□ 0.41
SHOX-201ENST00000334060 WARSP23381 471 aaKnown RBP17.6■□□□□ 0.41
SHOX-201ENST00000334060 ZBED6P86452 979 aa17.6■□□□□ 0.41
SHOX-201ENST00000334060 POF1BQ8WVV4 589 aa17.6■□□□□ 0.41
SHOX-201ENST00000334060 DNAJC7Q99615 494 aa17.6■□□□□ 0.41
SHOX-201ENST00000334060 CRISPLD1Q9H336 500 aa17.6■□□□□ 0.41
SHOX-201ENST00000334060 CHST7Q9NS84 486 aa17.6■□□□□ 0.41
SHOX-201ENST00000334060 BARX2Q9UMQ3 279 aaPredicted RBP17.6■□□□□ 0.41
SHOX-201ENST00000334060 CNTN6Q9UQ52 1028 aa17.6■□□□□ 0.41
SHOX-201ENST00000334060 PCDHB12Q9Y5F1 795 aa17.6■□□□□ 0.41
SHOX-201ENST00000334060 TULP2O00295 520 aa17.6■□□□□ 0.41
SHOX-201ENST00000334060 SOAT2O75908 522 aa17.6■□□□□ 0.41
SHOX-201ENST00000334060 CYP11A1P05108 521 aa17.6■□□□□ 0.41
SHOX-201ENST00000334060 CHRNB2P17787 502 aa17.6■□□□□ 0.41
SHOX-201ENST00000334060 TBXAS1P24557 533 aaPredicted RBP17.6■□□□□ 0.41
SHOX-201ENST00000334060 RBM10P98175 930 aaKnown RBP17.6■□□□□ 0.41
SHOX-201ENST00000334060 YWHAHQ04917 246 aaPredicted RBP17.6■□□□□ 0.41
SHOX-201ENST00000334060 MRPL58Q14197 206 aaKnown RBP17.6■□□□□ 0.41
SHOX-201ENST00000334060 PAQR9Q6ZVX9 377 aa17.6■□□□□ 0.41
SHOX-201ENST00000334060 ZNF571Q7Z3V5 609 aaPredicted RBP17.6■□□□□ 0.41
SHOX-201ENST00000334060 PASD1Q8IV76 773 aa17.6■□□□□ 0.41
SHOX-201ENST00000334060 EPS8L1Q8TE68 723 aa17.6■□□□□ 0.41
SHOX-201ENST00000334060 DDX1Q92499 740 aaKnown RBP17.6■□□□□ 0.41
SHOX-201ENST00000334060 PKMYT1Q99640 499 aa17.6■□□□□ 0.41
SHOX-201ENST00000334060 TTPALQ9BTX7 342 aa17.6■□□□□ 0.41
SHOX-201ENST00000334060 ZBP1Q9H171 429 aa17.6■□□□□ 0.41
SHOX-201ENST00000334060 HAUS4Q9H6D7 363 aa17.6■□□□□ 0.41
SHOX-201ENST00000334060 PUF60Q9UHX1 559 aaKnown RBP17.6■□□□□ 0.41
SHOX-201ENST00000334060 NOCTQ9UK39 431 aaKnown RBP17.6■□□□□ 0.41
SHOX-201ENST00000334060 COL4A4P53420 1690 aaPredicted RBP17.59■□□□□ 0.41
SHOX-201ENST00000334060 SOD2P04179 222 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 MMEP08473 750 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 CA8P35219 290 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 MDH1BQ5I0G3 518 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 PPP1R26Q5T8A7 1209 aaPredicted RBP17.59■□□□□ 0.41
SHOX-201ENST00000334060 PLPP4Q5VZY2 271 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 DDX53Q86TM3 631 aaKnown RBP17.59■□□□□ 0.41
SHOX-201ENST00000334060 TGS1Q96RS0 853 aaKnown RBP17.59■□□□□ 0.41
SHOX-201ENST00000334060 PCDHB18PQ96TA0 734 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 CLSTN3Q9BQT9 956 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 TTYH1Q9H313 450 aaPredicted RBP17.59■□□□□ 0.41
SHOX-201ENST00000334060 SNX25Q9H3E2 840 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 A0A0U1RQJ8 604 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 SOWAHDA6NJG2 315 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 TBC1D4O60343 1298 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 BEST1O76090 585 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 CD19P15391 556 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 CYP11B1P15538 503 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 STAT1P42224 750 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 ERVK-21P61565 698 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 PTK2Q05397 1052 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 C2CD6Q53TS8 623 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 SFMBT2Q5VUG0 894 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 ATRIPQ8WXE1 791 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 TIFAQ96CG3 184 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 TMEM176AQ96HP8 235 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 FAM161BQ96MY7 647 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 SYT15Q9BQS2 421 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 SYT11Q9BT88 431 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 NUP58Q9BVL2 599 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 CYP3A43Q9HB55 503 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 TJP2Q9UDY2 1190 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms