RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 DUSP4Q13115 394 aa17.54■□□□□ 0.4
C11orf88-201ENST00000332814 MGAT5BQ3V5L5 792 aa17.54■□□□□ 0.4
C11orf88-201ENST00000332814 INTS6LQ5JSJ4 861 aaKnown RBP17.54■□□□□ 0.4
C11orf88-201ENST00000332814 SCARA5Q6ZMJ2 495 aa17.54■□□□□ 0.4
C11orf88-201ENST00000332814 GET4Q7L5D6 327 aaPredicted RBP17.54■□□□□ 0.4
C11orf88-201ENST00000332814 GRASPQ7Z6J2 395 aaPredicted RBP17.54■□□□□ 0.4
C11orf88-201ENST00000332814 FILIP1Q7Z7B0 1213 aa17.54■□□□□ 0.4
C11orf88-201ENST00000332814 ATAD1Q8NBU5 361 aa17.54■□□□□ 0.4
C11orf88-201ENST00000332814 FAM200AQ8TCP9 573 aa17.54■□□□□ 0.4
C11orf88-201ENST00000332814 SPPL2BQ8TCT7 592 aa17.54■□□□□ 0.4
C11orf88-201ENST00000332814 ZNF512Q96ME7 567 aaPredicted RBP17.54■□□□□ 0.4
C11orf88-201ENST00000332814 RTP3Q9BQQ7 232 aa17.54■□□□□ 0.4
C11orf88-201ENST00000332814 XYLT2Q9H1B5 865 aa17.54■□□□□ 0.4
C11orf88-201ENST00000332814 VRTNQ9H8Y1 702 aa17.54■□□□□ 0.4
C11orf88-201ENST00000332814 ABI2Q9NYB9 513 aaPredicted RBP17.54■□□□□ 0.4
C11orf88-201ENST00000332814 RWDD2AQ9UIY3 292 aa17.54■□□□□ 0.4
C11orf88-201ENST00000332814 PCDHB5Q9Y5E4 795 aa17.54■□□□□ 0.4
C11orf88-201ENST00000332814 SCN1AP35498 2009 aa17.54■□□□□ 0.4
C11orf88-201ENST00000332814 BRWD1Q9NSI6 2320 aa17.53■□□□□ 0.4
C11orf88-201ENST00000332814 C19orf67A6NJJ6 358 aa17.53■□□□□ 0.4
C11orf88-201ENST00000332814 TACC1O75410 805 aa17.53■□□□□ 0.4
C11orf88-201ENST00000332814 VNN1O95497 513 aa17.53■□□□□ 0.4
C11orf88-201ENST00000332814 FAM163BP0C2L3 166 aa17.53■□□□□ 0.4
C11orf88-201ENST00000332814 TRIM21P19474 475 aaKnown RBP17.53■□□□□ 0.4
C11orf88-201ENST00000332814 FSHRP23945 695 aa17.53■□□□□ 0.4
C11orf88-201ENST00000332814 TUFMP49411 452 aaKnown RBP17.53■□□□□ 0.4
C11orf88-201ENST00000332814 EPHB3P54753 998 aa17.53■□□□□ 0.4
C11orf88-201ENST00000332814 NLRP12P59046 1061 aa17.53■□□□□ 0.4
C11orf88-201ENST00000332814 PPP3CAQ08209 521 aa17.53■□□□□ 0.4
C11orf88-201ENST00000332814 VEPH1Q14D04 833 aa17.53■□□□□ 0.4
C11orf88-201ENST00000332814 MAPRE1Q15691 268 aaKnown RBP17.53■□□□□ 0.4
C11orf88-201ENST00000332814 PABPC1LQ4VXU2 614 aaKnown RBP17.53■□□□□ 0.4
C11orf88-201ENST00000332814 C1orf220Q5T0J3 134 aa17.53■□□□□ 0.4
C11orf88-201ENST00000332814 FRMD5Q7Z6J6 570 aa17.53■□□□□ 0.4
C11orf88-201ENST00000332814 OSTM1Q86WC4 334 aa17.53■□□□□ 0.4
C11orf88-201ENST00000332814 PLCD3Q8N3E9 789 aa17.53■□□□□ 0.4
C11orf88-201ENST00000332814 DUSP9Q99956 384 aaKnown RBP17.53■□□□□ 0.4
C11orf88-201ENST00000332814 SYT15Q9BQS2 421 aa17.53■□□□□ 0.4
C11orf88-201ENST00000332814 HSFX1Q9UBD0 423 aa17.53■□□□□ 0.4
C11orf88-201ENST00000332814 CDH9Q9ULB4 789 aa17.53■□□□□ 0.4
C11orf88-201ENST00000332814 USTQ9Y2C2 406 aa17.53■□□□□ 0.4
C11orf88-201ENST00000332814 SLC27A5Q9Y2P5 690 aa17.53■□□□□ 0.4
C11orf88-201ENST00000332814 TCF20Q9UGU0 1960 aaKnown RBP17.53■□□□□ 0.4
C11orf88-201ENST00000332814 A8MXQ7 604 aa17.52■□□□□ 0.4
C11orf88-201ENST00000332814 LOC730098B7Z3J9 87 aa17.52■□□□□ 0.4
C11orf88-201ENST00000332814 GABRDO14764 452 aa17.52■□□□□ 0.4
C11orf88-201ENST00000332814 PAPLNO95428 1278 aa17.52■□□□□ 0.4
C11orf88-201ENST00000332814 CCDC192P0DO97 292 aa17.52■□□□□ 0.4
C11orf88-201ENST00000332814 PTPN2P17706 415 aa17.52■□□□□ 0.4
C11orf88-201ENST00000332814 GNL1P36915 607 aaPredicted RBP17.52■□□□□ 0.4
C11orf88-201ENST00000332814 NOP14P78316 857 aaKnown RBP17.52■□□□□ 0.4
C11orf88-201ENST00000332814 TAF12Q16514 161 aa17.52■□□□□ 0.4
C11orf88-201ENST00000332814 WDR44Q5JSH3 913 aa17.52■□□□□ 0.4
C11orf88-201ENST00000332814 C4orf50Q6ZRC1 276 aa17.52■□□□□ 0.4
C11orf88-201ENST00000332814 CREBRFQ8IUR6 639 aa17.52■□□□□ 0.4
C11orf88-201ENST00000332814 SPATA2LQ8IUW3 424 aaPredicted RBP17.52■□□□□ 0.4
C11orf88-201ENST00000332814 FBXL13Q8NEE6 735 aa17.52■□□□□ 0.4
C11orf88-201ENST00000332814 FEZF2Q8TBJ5 459 aa17.52■□□□□ 0.4
C11orf88-201ENST00000332814 TAS1R2Q8TE23 839 aa17.52■□□□□ 0.4
C11orf88-201ENST00000332814 KBTBD7Q8WVZ9 684 aa17.52■□□□□ 0.4
C11orf88-201ENST00000332814 CORO1BQ9BR76 489 aa17.52■□□□□ 0.4
C11orf88-201ENST00000332814 MRPL45Q9BRJ2 306 aaKnown RBP17.52■□□□□ 0.4
C11orf88-201ENST00000332814 SRRTQ9BXP5 876 aaKnown RBP17.52■□□□□ 0.4
C11orf88-201ENST00000332814 DNAI2Q9GZS0 605 aa17.52■□□□□ 0.4
C11orf88-201ENST00000332814 PRUNE2Q8WUY3 3088 aa17.51■□□□□ 0.39
C11orf88-201ENST00000332814 C2CD4DB7Z1M9 353 aa17.51■□□□□ 0.39
C11orf88-201ENST00000332814 N4BP1O75113 896 aaKnown RBP17.51■□□□□ 0.39
C11orf88-201ENST00000332814 ASS1P00966 412 aaKnown RBP17.51■□□□□ 0.39
C11orf88-201ENST00000332814 PDGFRBP09619 1106 aa17.51■□□□□ 0.39
C11orf88-201ENST00000332814 PSMC1P62191 440 aaKnown RBP17.51■□□□□ 0.39
C11orf88-201ENST00000332814 CETN1Q12798 172 aa17.51■□□□□ 0.39
C11orf88-201ENST00000332814 DPCR1Q3MIW9 517 aa17.51■□□□□ 0.39
C11orf88-201ENST00000332814 CCDC183Q5T5S1 534 aa17.51■□□□□ 0.39
C11orf88-201ENST00000332814 CYP4A22Q5TCH4 519 aa17.51■□□□□ 0.39
C11orf88-201ENST00000332814 SASS6Q6UVJ0 657 aa17.51■□□□□ 0.39
C11orf88-201ENST00000332814 PDZD4Q76G19 769 aaPredicted RBP17.51■□□□□ 0.39
C11orf88-201ENST00000332814 ITIH5Q86UX2 942 aa17.51■□□□□ 0.39
C11orf88-201ENST00000332814 LEMD2Q8NC56 503 aa17.51■□□□□ 0.39
C11orf88-201ENST00000332814 PI4K2AQ9BTU6 479 aa17.51■□□□□ 0.39
C11orf88-201ENST00000332814 SMYD3Q9H7B4 428 aa17.51■□□□□ 0.39
C11orf88-201ENST00000332814 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.51■□□□□ 0.39
C11orf88-201ENST00000332814 ASAH2Q9NR71 780 aa17.51■□□□□ 0.39
C11orf88-201ENST00000332814 HCFC1R1Q9NWW0 138 aa17.51■□□□□ 0.39
C11orf88-201ENST00000332814 DNMT3BQ9UBC3 853 aaKnown RBP17.51■□□□□ 0.39
C11orf88-201ENST00000332814 GTF3C4Q9UKN8 822 aa17.51■□□□□ 0.39
C11orf88-201ENST00000332814 MRPS23Q9Y3D9 190 aaKnown RBP17.51■□□□□ 0.39
C11orf88-201ENST00000332814 RHOP08100 348 aa17.5■□□□□ 0.39
C11orf88-201ENST00000332814 RAP1GAPP47736 663 aa17.5■□□□□ 0.39
C11orf88-201ENST00000332814 CDR1P51861 262 aa17.5■□□□□ 0.39
C11orf88-201ENST00000332814 NTHL1P78549 312 aa17.5■□□□□ 0.39
C11orf88-201ENST00000332814 CYP27A1Q02318 531 aa17.5■□□□□ 0.39
C11orf88-201ENST00000332814 SPOPLQ6IQ16 392 aa17.5■□□□□ 0.39
C11orf88-201ENST00000332814 LIMS2Q7Z4I7 341 aa17.5■□□□□ 0.39
C11orf88-201ENST00000332814 LRRTM3Q86VH5 581 aa17.5■□□□□ 0.39
C11orf88-201ENST00000332814 RNF135Q8IUD6 432 aa17.5■□□□□ 0.39
C11orf88-201ENST00000332814 ZDHHC14Q8IZN3 488 aa17.5■□□□□ 0.39
C11orf88-201ENST00000332814 SLC35C1Q96A29 364 aa17.5■□□□□ 0.39
C11orf88-201ENST00000332814 TNIP3Q96KP6 325 aa17.5■□□□□ 0.39
C11orf88-201ENST00000332814 NIF3L1Q9GZT8 377 aa17.5■□□□□ 0.39
C11orf88-201ENST00000332814 CD320Q9NPF0 282 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms