RNA–Protein interactions for RNA: ENST00000330554.4

TPM3P8-201, Transcript of tropomyosin 3 pseudogene 8, humanhuman

BASIC

Gene TPM3P8, Length 643 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P8-201ENST00000330554 PHF7Q9BWX1 381 aaPredicted RBP16.16■□□□□ 0.18
TPM3P8-201ENST00000330554 XYLT2Q9H1B5 865 aa16.16■□□□□ 0.18
TPM3P8-201ENST00000330554 VRTNQ9H8Y1 702 aa16.16■□□□□ 0.18
TPM3P8-201ENST00000330554 CDH9Q9ULB4 789 aa16.16■□□□□ 0.18
TPM3P8-201ENST00000330554 PCDHB5Q9Y5E4 795 aa16.16■□□□□ 0.18
TPM3P8-201ENST00000330554 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.16■□□□□ 0.18
TPM3P8-201ENST00000330554 A8MXQ7 604 aa16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 TACC1O75410 805 aa16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 LETM1O95202 739 aaPredicted RBP16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 ANK1P16157 1881 aa16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 WARSP23381 471 aaKnown RBP16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 HOXA9P31269 272 aa16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 MTIF2P46199 727 aaKnown RBP16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 TUFMP49411 452 aaKnown RBP16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 EPHB3P54753 998 aa16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 DUSP4Q13115 394 aa16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 PLD1Q13393 1074 aa16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 MAPRE1Q15691 268 aaKnown RBP16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 STX1AQ16623 288 aa16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 MGAT5BQ3V5L5 792 aa16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 OSTM1Q86WC4 334 aa16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 ATAD1Q8NBU5 361 aa16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 FAM200AQ8TCP9 573 aa16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 RPGRIP1Q96KN7 1286 aa16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 ZNF512Q96ME7 567 aaPredicted RBP16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 RTP3Q9BQQ7 232 aa16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 SYT15Q9BQS2 421 aa16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 MRPL45Q9BRJ2 306 aaKnown RBP16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 PI4K2AQ9BTU6 479 aa16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 RAB20Q9NX57 234 aa16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 ABI2Q9NYB9 513 aaPredicted RBP16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 SLC27A5Q9Y2P5 690 aa16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 NR2E1Q9Y466 385 aa16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 INSL5Q9Y5Q6 135 aa16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 REV3LO60673 3130 aa16.15■□□□□ 0.18
TPM3P8-201ENST00000330554 MTMR11A4FU01 709 aa16.14■□□□□ 0.17
TPM3P8-201ENST00000330554 GABRDO14764 452 aa16.14■□□□□ 0.17
TPM3P8-201ENST00000330554 SEC24AO95486 1093 aa16.14■□□□□ 0.17
TPM3P8-201ENST00000330554 ASS1P00966 412 aaKnown RBP16.14■□□□□ 0.17
TPM3P8-201ENST00000330554 MCCD1P59942 119 aaPredicted RBP16.14■□□□□ 0.17
TPM3P8-201ENST00000330554 TWF1Q12792 350 aa16.14■□□□□ 0.17
TPM3P8-201ENST00000330554 TAF12Q16514 161 aa16.14■□□□□ 0.17
TPM3P8-201ENST00000330554 SKOR2Q2VWA4 1001 aaPredicted RBP16.14■□□□□ 0.17
TPM3P8-201ENST00000330554 INTS6LQ5JSJ4 861 aaKnown RBP16.14■□□□□ 0.17
TPM3P8-201ENST00000330554 C4orf50Q6ZRC1 276 aa16.14■□□□□ 0.17
TPM3P8-201ENST00000330554 RBM43Q6ZSC3 357 aaKnown RBP16.14■□□□□ 0.17
TPM3P8-201ENST00000330554 SPATA2LQ8IUW3 424 aaPredicted RBP16.14■□□□□ 0.17
TPM3P8-201ENST00000330554 ADHFE1Q8IWW8 467 aa16.14■□□□□ 0.17
TPM3P8-201ENST00000330554 SPPL2BQ8TCT7 592 aa16.14■□□□□ 0.17
TPM3P8-201ENST00000330554 SLC35C1Q96A29 364 aa16.14■□□□□ 0.17
TPM3P8-201ENST00000330554 SEPT5Q99719 369 aaPredicted RBP16.14■□□□□ 0.17
TPM3P8-201ENST00000330554 RHOBTB2Q9BYZ6 727 aa16.14■□□□□ 0.17
TPM3P8-201ENST00000330554 THAP9Q9H5L6 903 aa16.14■□□□□ 0.17
TPM3P8-201ENST00000330554 SMYD3Q9H7B4 428 aa16.14■□□□□ 0.17
TPM3P8-201ENST00000330554 GTF3C4Q9UKN8 822 aa16.14■□□□□ 0.17
TPM3P8-201ENST00000330554 SCN1AP35498 2009 aa16.14■□□□□ 0.17
TPM3P8-201ENST00000330554 AFPP02771 609 aaKnown RBP16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 PTPN2P17706 415 aa16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 LMO2P25791 158 aa16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 FMO5P49326 533 aa16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 CDR1P51861 262 aa16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 CDH8P55286 799 aa16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 NOP14P78316 857 aaKnown RBP16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 VEPH1Q14D04 833 aa16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 SPOPLQ6IQ16 392 aa16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 OTOP3Q7RTS5 596 aa16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 LIMS2Q7Z4I7 341 aa16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 GRASPQ7Z6J2 395 aaPredicted RBP16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 LRRTM3Q86VH5 581 aa16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 KBTBD7Q8WVZ9 684 aa16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 ELMO3Q96BJ8 720 aa16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 ZNF707Q96C28 371 aaPredicted RBP16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 ACSF2Q96CM8 615 aaPredicted RBP16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 CNOT6LQ96LI5 555 aaKnown RBP16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 NIF3L1Q9GZT8 377 aa16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 NAT10Q9H0A0 1025 aaKnown RBP16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 POMKQ9H5K3 350 aa16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 CYP3A43Q9HB55 503 aa16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 TMEM63CQ9P1W3 806 aa16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 HSFX1Q9UBD0 423 aa16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 CDH22Q9UJ99 828 aa16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 ATG2AQ2TAZ0 1938 aa16.13■□□□□ 0.17
TPM3P8-201ENST00000330554 VWA8A3KMH1 1905 aa16.12■□□□□ 0.17
TPM3P8-201ENST00000330554 PTPN1P18031 435 aaKnown RBP16.12■□□□□ 0.17
TPM3P8-201ENST00000330554 SP100P23497 879 aaPredicted RBP16.12■□□□□ 0.17
TPM3P8-201ENST00000330554 FSHRP23945 695 aa16.12■□□□□ 0.17
TPM3P8-201ENST00000330554 RAP1GAPP47736 663 aa16.12■□□□□ 0.17
TPM3P8-201ENST00000330554 PSMC1P62191 440 aaKnown RBP16.12■□□□□ 0.17
TPM3P8-201ENST00000330554 CYP27A1Q02318 531 aa16.12■□□□□ 0.17
TPM3P8-201ENST00000330554 KCNH2Q12809 1159 aa16.12■□□□□ 0.17
TPM3P8-201ENST00000330554 KLHL40Q2TBA0 621 aa16.12■□□□□ 0.17
TPM3P8-201ENST00000330554 CBWD6Q4V339 395 aa16.12■□□□□ 0.17
TPM3P8-201ENST00000330554 CBWD3Q5JTY5 395 aa16.12■□□□□ 0.17
TPM3P8-201ENST00000330554 CBWD5Q5RIA9 395 aa16.12■□□□□ 0.17
TPM3P8-201ENST00000330554 CYP4A22Q5TCH4 519 aa16.12■□□□□ 0.17
TPM3P8-201ENST00000330554 ITIH5Q86UX2 942 aa16.12■□□□□ 0.17
TPM3P8-201ENST00000330554 TRIM59Q8IWR1 403 aa16.12■□□□□ 0.17
TPM3P8-201ENST00000330554 GJD3Q8N144 294 aa16.12■□□□□ 0.17
TPM3P8-201ENST00000330554 TTC39CQ8N584 583 aa16.12■□□□□ 0.17
TPM3P8-201ENST00000330554 SEMA4DQ92854 862 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms