RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 DNAJC24Q6P3W2 148 aa17.97■□□□□ 0.47
DDX41-201ENST00000330503 EMBQ6PCB8 327 aa17.97■□□□□ 0.47
DDX41-201ENST00000330503 MAATS1Q7Z4T9 603 aa17.97■□□□□ 0.47
DDX41-201ENST00000330503 KLHDC9Q8NEP7 349 aa17.97■□□□□ 0.47
DDX41-201ENST00000330503 CAVIN3Q969G5 261 aa17.97■□□□□ 0.47
DDX41-201ENST00000330503 MRPL45Q9BRJ2 306 aaKnown RBP17.97■□□□□ 0.47
DDX41-201ENST00000330503 FAM153AQ9UHL3 310 aa17.97■□□□□ 0.47
DDX41-201ENST00000330503 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.97■□□□□ 0.47
DDX41-201ENST00000330503 IPPQ9Y573 584 aa17.97■□□□□ 0.47
DDX41-201ENST00000330503 CEP83Q9Y592 693 aa17.97■□□□□ 0.47
DDX41-201ENST00000330503 NME7Q9Y5B8 376 aa17.97■□□□□ 0.47
DDX41-201ENST00000330503 CDY2AQ9Y6F7 541 aa17.97■□□□□ 0.47
DDX41-201ENST00000330503 PIRO00625 290 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 FSCN2O14926 492 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 RARAP10276 462 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 KCNE1P15382 129 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 HSPA6P17066 643 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 MAN1A1P33908 653 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 SP3Q02447 781 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 PPP2R5EQ16537 467 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 DDX42Q86XP3 938 aaKnown RBP eCLIP17.96■□□□□ 0.47
DDX41-201ENST00000330503 SEC14L1Q92503 715 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 XPNPEP3Q9NQH7 507 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 PARP2Q9UGN5 583 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 IP6K2Q9UHH9 426 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 UBQLN1Q9UMX0 589 aaKnown RBP17.96■□□□□ 0.47
DDX41-201ENST00000330503 PDCD11Q14690 1871 aaKnown RBP17.96■□□□□ 0.47
DDX41-201ENST00000330503 GOLGA6L10A0A0M3HER8 536 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 A0A0U1RQG5 324 aaPredicted RBP17.96■□□□□ 0.47
DDX41-201ENST00000330503 PHF2O75151 1096 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 ECHS1P30084 290 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 PTGIRP43119 386 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 PAK2Q13177 524 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 KCNA10Q16322 511 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 CCSAPQ6IQ19 270 aaPredicted RBP17.96■□□□□ 0.47
DDX41-201ENST00000330503 LRRC52Q8N7C0 313 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 CAPNS2Q96L46 248 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 CPXM1Q96SM3 734 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 HERPUD2Q9BSE4 406 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 USTQ9Y2C2 406 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 TRPV2Q9Y5S1 764 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 SNX9Q9Y5X1 595 aa17.96■□□□□ 0.47
DDX41-201ENST00000330503 GRIN2DO15399 1336 aa17.96■□□□□ 0.46
DDX41-201ENST00000330503 CHRNA1P02708 482 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 ASGR1P07306 291 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 GPD2P43304 727 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 LLGL1Q15334 1064 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 CYP1B1Q16678 543 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 TTC27Q6P3X3 843 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 SERINC5Q86VE9 423 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 TTC39CQ8N584 583 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 C3orf20Q8ND61 904 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.95■□□□□ 0.46
DDX41-201ENST00000330503 MCEEQ96PE7 176 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 NT5C1AQ9BXI3 368 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 KIAA1257Q9ULG3 409 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 PSTPIP1O43586 416 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 HMGCRP04035 888 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 PRKAR2AP13861 404 aaKnown RBP17.95■□□□□ 0.46
DDX41-201ENST00000330503 TCF4P15884 667 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 SOX4Q06945 474 aaPredicted RBP17.95■□□□□ 0.46
DDX41-201ENST00000330503 NNTQ13423 1086 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 DEFB115Q30KQ5 88 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 SGO2Q562F6 1265 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 FAM47CQ5HY64 1035 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 RHOT1Q8IXI2 618 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 EIF1ADQ8N9N8 165 aaKnown RBP17.95■□□□□ 0.46
DDX41-201ENST00000330503 UBA3Q8TBC4 463 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 C18orf8Q96DM3 657 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 TRIM51Q9BSJ1 452 aa17.95■□□□□ 0.46
DDX41-201ENST00000330503 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.95■□□□□ 0.46
DDX41-201ENST00000330503 SIGLEC16A6NMB1 481 aa17.94■□□□□ 0.46
DDX41-201ENST00000330503 F8VP50 259 aa17.94■□□□□ 0.46
DDX41-201ENST00000330503 ERBB2P04626 1255 aa17.94■□□□□ 0.46
DDX41-201ENST00000330503 OAS2P29728 719 aaKnown RBP17.94■□□□□ 0.46
DDX41-201ENST00000330503 CHRNA3P32297 505 aa17.94■□□□□ 0.46
DDX41-201ENST00000330503 GABRB2P47870 512 aa17.94■□□□□ 0.46
DDX41-201ENST00000330503 TAP1Q03518 808 aa17.94■□□□□ 0.46
DDX41-201ENST00000330503 MGAT3Q09327 533 aa17.94■□□□□ 0.46
DDX41-201ENST00000330503 CUL1Q13616 776 aa17.94■□□□□ 0.46
DDX41-201ENST00000330503 LCLAT1Q6UWP7 414 aa17.94■□□□□ 0.46
DDX41-201ENST00000330503 XYLT1Q86Y38 959 aa17.94■□□□□ 0.46
DDX41-201ENST00000330503 C12orf29Q8N999 325 aa17.94■□□□□ 0.46
DDX41-201ENST00000330503 TSEN2Q8NCE0 465 aaKnown RBP17.94■□□□□ 0.46
DDX41-201ENST00000330503 MAGOHBQ96A72 148 aaKnown RBP17.94■□□□□ 0.46
DDX41-201ENST00000330503 TSPAN18Q96SJ8 248 aa17.94■□□□□ 0.46
DDX41-201ENST00000330503 OSBPL7Q9BZF2 842 aa17.94■□□□□ 0.46
DDX41-201ENST00000330503 SENP6Q9GZR1 1112 aaPredicted RBP17.94■□□□□ 0.46
DDX41-201ENST00000330503 PCYOX1Q9UHG3 505 aa17.94■□□□□ 0.46
DDX41-201ENST00000330503 STRIP2Q9ULQ0 834 aa17.94■□□□□ 0.46
DDX41-201ENST00000330503 ST3GAL5Q9UNP4 418 aa17.94■□□□□ 0.46
DDX41-201ENST00000330503 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.94■□□□□ 0.46
DDX41-201ENST00000330503 M0QYV0 167 aa17.93■□□□□ 0.46
DDX41-201ENST00000330503 SPTLC1O15269 473 aa17.93■□□□□ 0.46
DDX41-201ENST00000330503 DAPK3O43293 454 aa17.93■□□□□ 0.46
DDX41-201ENST00000330503 PFKMP08237 780 aa17.93■□□□□ 0.46
DDX41-201ENST00000330503 PSMC1P62191 440 aaKnown RBP17.93■□□□□ 0.46
DDX41-201ENST00000330503 DR1Q01658 176 aa17.93■□□□□ 0.46
DDX41-201ENST00000330503 SOWAHAQ2M3V2 549 aa17.93■□□□□ 0.46
DDX41-201ENST00000330503 ATP13A4Q4VNC1 1196 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms