RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 HP1BP3Q5SSJ5 553 aaPredicted RBP16.21■□□□□ 0.19
BRCC3-201ENST00000330045 LRRC38Q5VT99 294 aa16.21■□□□□ 0.19
BRCC3-201ENST00000330045 SPOCD1Q6ZMY3 1216 aa16.21■□□□□ 0.19
BRCC3-201ENST00000330045 ASRGL1Q7L266 308 aa16.21■□□□□ 0.19
BRCC3-201ENST00000330045 MCEEQ96PE7 176 aa16.21■□□□□ 0.19
BRCC3-201ENST00000330045 IMPG2Q9BZV3 1241 aa16.21■□□□□ 0.19
BRCC3-201ENST00000330045 DHX33Q9H6R0 707 aaKnown RBP16.21■□□□□ 0.19
BRCC3-201ENST00000330045 ADARB2Q9NS39 739 aaKnown RBP16.21■□□□□ 0.19
BRCC3-201ENST00000330045 SNCAIPQ9Y6H5 919 aa16.21■□□□□ 0.19
BRCC3-201ENST00000330045 LOC102724159A0A0B4J2E5 919 aa16.21■□□□□ 0.18
BRCC3-201ENST00000330045 PRPF4O43172 522 aaKnown RBP eCLIP16.21■□□□□ 0.18
BRCC3-201ENST00000330045 STAM2O75886 525 aa16.21■□□□□ 0.18
BRCC3-201ENST00000330045 ZNF132P52740 706 aa16.21■□□□□ 0.18
BRCC3-201ENST00000330045 CCDC15Q0P6D6 951 aa16.21■□□□□ 0.18
BRCC3-201ENST00000330045 MORF4L2Q15014 288 aa16.21■□□□□ 0.18
BRCC3-201ENST00000330045 PWP2Q15269 919 aaKnown RBP16.21■□□□□ 0.18
BRCC3-201ENST00000330045 SEZ6Q53EL9 994 aa16.21■□□□□ 0.18
BRCC3-201ENST00000330045 DCUN1D2Q6PH85 259 aa16.21■□□□□ 0.18
BRCC3-201ENST00000330045 AGAP11Q8TF27 550 aa16.21■□□□□ 0.18
BRCC3-201ENST00000330045 N4BP2L2Q92802 583 aaPredicted RBP16.21■□□□□ 0.18
BRCC3-201ENST00000330045 TRABDQ9H4I3 376 aa16.21■□□□□ 0.18
BRCC3-201ENST00000330045 ZNF302Q9NR11 478 aa16.21■□□□□ 0.18
BRCC3-201ENST00000330045 CYP39A1Q9NYL5 469 aa16.21■□□□□ 0.18
BRCC3-201ENST00000330045 ZNF214Q9UL59 606 aaPredicted RBP16.21■□□□□ 0.18
BRCC3-201ENST00000330045 MAGEB2O15479 319 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 OATP04181 439 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 KRT15P19012 456 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 ARL2P36404 184 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 OAZ1P54368 228 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 SP2Q02086 613 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 PKN2Q16513 984 aaKnown RBP16.2■□□□□ 0.18
BRCC3-201ENST00000330045 SCARA3Q6AZY7 606 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 DNAJC24Q6P3W2 148 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 DENND1AQ8TEH3 1009 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 SLC7A3Q8WY07 619 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 CLMNQ96JQ2 1002 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 VPS37BQ9H9H4 285 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 EBF2Q9HAK2 575 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 STK38LQ9Y2H1 464 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 STARD13Q9Y3M8 1113 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 L3MBTL1Q9Y468 752 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 AFG3L2Q9Y4W6 797 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 MAFBQ9Y5Q3 323 aaPredicted RBP16.2■□□□□ 0.18
BRCC3-201ENST00000330045 ADGRA2Q96PE1 1338 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 hCG_1818297A0A087WSY0 165 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 TCRBV5S1A1TA0A578 114 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 CST3P01034 146 aaPredicted RBP16.2■□□□□ 0.18
BRCC3-201ENST00000330045 HARSP12081 509 aaKnown RBP16.2■□□□□ 0.18
BRCC3-201ENST00000330045 SKIV2L2P42285 1042 aaKnown RBP16.2■□□□□ 0.18
BRCC3-201ENST00000330045 SLC18A1P54219 525 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 VCPP55072 806 aaKnown RBP16.2■□□□□ 0.18
BRCC3-201ENST00000330045 SPARCL1Q14515 664 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 OASLQ15646 514 aaKnown RBP16.2■□□□□ 0.18
BRCC3-201ENST00000330045 CCDC142Q17RM4 750 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 ACCSLQ4AC99 568 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 TFDP3Q5H9I0 405 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 ZBED8Q8IZ13 594 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 UBR7Q8N806 425 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 ZNF526Q8TF50 670 aaPredicted RBP16.2■□□□□ 0.18
BRCC3-201ENST00000330045 HAUS1Q96CS2 278 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 STAMBPL1Q96FJ0 436 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 SMC6Q96SB8 1091 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 TRIM33Q9UPN9 1127 aa16.2■□□□□ 0.18
BRCC3-201ENST00000330045 ALOX15BO15296 676 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 EDN1P05305 212 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 CCNB1P14635 433 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 MSH2P43246 934 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 PLCB3Q01970 1234 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 OGDHQ02218 1023 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 DNAJC3Q13217 504 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 TMEM132BQ14DG7 1078 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 WDR72Q3MJ13 1102 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 TREML2Q5T2D2 321 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 RNASEH2BQ5TBB1 312 aaKnown RBP16.19■□□□□ 0.18
BRCC3-201ENST00000330045 TXNRD3NBQ6F5E7 133 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 CAPN12Q6ZSI9 719 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 CENPUQ71F23 418 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 ANKLE1Q8NAG6 615 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 FBF1Q8TES7 1133 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 KIF9Q9HAQ2 790 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 SENP1Q9P0U3 644 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 PHTF1Q9UMS5 762 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 SMG5Q9UPR3 1016 aaKnown RBP16.19■□□□□ 0.18
BRCC3-201ENST00000330045 LRRD1A4D1F6 860 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 ATP2A1O14983 1001 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 UNC5CO95185 931 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 LSM8O95777 96 aaKnown RBP16.19■□□□□ 0.18
BRCC3-201ENST00000330045 PTPN7P35236 360 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 PIGHQ14442 188 aaPredicted RBP16.19■□□□□ 0.18
BRCC3-201ENST00000330045 TLDC1Q6P9B6 456 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 TMEM35BQ8NCS4 154 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 PRCCQ92733 491 aaPredicted RBP16.19■□□□□ 0.18
BRCC3-201ENST00000330045 NKD2Q969F2 451 aaPredicted RBP16.19■□□□□ 0.18
BRCC3-201ENST00000330045 ACSF2Q96CM8 615 aaPredicted RBP16.19■□□□□ 0.18
BRCC3-201ENST00000330045 TMEM121Q9BTD3 319 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 TMEM134Q9H6X4 195 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 AS3MTQ9HBK9 375 aa16.19■□□□□ 0.18
BRCC3-201ENST00000330045 DDX56Q9NY93 547 aaKnown RBP16.19■□□□□ 0.18
BRCC3-201ENST00000330045 SGK1O00141 431 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 NDC80O14777 642 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms