RNA–Protein interactions for RNA: ENST00000328333.12

COL7A1-201, Transcript of collagen type VII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL7A1, Length 9,276 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-201ENST00000328333 NARS2Q96I59 477 aaKnown RBP14.85□□□□□ -0.03
COL7A1-201ENST00000328333 ZNF496Q96IT1 587 aaPredicted RBP14.85□□□□□ -0.03
COL7A1-201ENST00000328333 PDCD10Q9BUL8 212 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 ZFYVE1Q9HBF4 777 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 TUFT1Q9NNX1 390 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 RAD54BQ9Y620 910 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 AHCYL1O43865 530 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 NR1I3Q14994 352 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 TTC27Q6P3X3 843 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 AGPAT1Q99943 283 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 GGA2Q9UJY4 613 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 GCLMP48507 274 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 LONRF1Q17RB8 773 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 THEMIS2Q5TEJ8 643 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 CCDC36Q8IYA8 594 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 SLC35G2Q8TBE7 412 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 SARS2Q9NP81 518 aaKnown RBP14.85□□□□□ -0.03
COL7A1-201ENST00000328333 KRT34O76011 436 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 ANXA6P08133 673 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 E4F1Q66K89 784 aaPredicted RBP14.85□□□□□ -0.03
COL7A1-201ENST00000328333 MOSPD2Q8NHP6 518 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 OSCP1Q8WVF1 389 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 RPAP3Q9H6T3 665 aaPredicted RBP14.85□□□□□ -0.03
COL7A1-201ENST00000328333 NEMP1O14524 444 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 TPP2P29144 1249 aaPredicted RBP14.85□□□□□ -0.03
COL7A1-201ENST00000328333 SHROOM1Q2M3G4 852 aaPredicted RBP14.85□□□□□ -0.03
COL7A1-201ENST00000328333 SEL1L3Q68CR1 1132 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 STKLD1Q8NE28 680 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 OR6B3Q8NGW1 331 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 AP3S1Q92572 193 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 FHDC1Q9C0D6 1143 aaPredicted RBP14.85□□□□□ -0.03
COL7A1-201ENST00000328333 TPRKBQ9Y3C4 175 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 HECW2Q9P2P5 1572 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 GRIK1P39086 918 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 KIF2BQ8N4N8 673 aa14.85□□□□□ -0.03
COL7A1-201ENST00000328333 NDUFS3O75489 264 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 TSGA10IPQ3SY00 556 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 TJP2Q9UDY2 1190 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 PRKAA2P54646 552 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 FCHO2Q0JRZ9 810 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 RFX8Q6ZV50 586 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 C16orf62Q7Z3J2 963 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 RNF135Q8IUD6 432 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 GPD1LQ8N335 351 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 SHCBP1Q8NEM2 672 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 VPS33AQ96AX1 596 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 MARCOQ9UEW3 520 aaPredicted RBP14.84□□□□□ -0.03
COL7A1-201ENST00000328333 EFCAB6Q5THR3 1501 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 SOAT2O75908 522 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 SRGNP10124 158 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 MAPK7Q13164 816 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 CCDC81Q6ZN84 652 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 TMEM179Q6ZVK1 233 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 RORBQ92753 470 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 ZNF333Q96JL9 665 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 PAGR1Q9BTK6 254 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 HSD17B3P37058 310 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 CNTN1Q12860 1018 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 CCDC144BQ3MJ40 725 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 ZNF568Q3ZCX4 644 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 SYTL3Q4VX76 610 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 KCTD1Q719H9 257 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 SH2D3CQ8N5H7 860 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 C9orf16Q9BUW7 83 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 KIFC1Q9BW19 673 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 RBM12Q9NTZ6 932 aaKnown RBP14.84□□□□□ -0.03
COL7A1-201ENST00000328333 BARHL2Q9NY43 387 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 IPPQ9Y573 584 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 MAGEA4P43358 317 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 TAS2R42Q7RTR8 314 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 SLC22A9Q8IVM8 553 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 C1orf54Q8WWF1 131 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 ASZ1Q8WWH4 475 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 VPS4BO75351 444 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 EFHC1Q5JVL4 640 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 MZT2BQ6NZ67 158 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 CNKSR1Q969H4 720 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 PIGSQ96S52 555 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 GTF2IP78347 998 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 NAIF1Q69YI7 327 aaPredicted RBP14.84□□□□□ -0.03
COL7A1-201ENST00000328333 ERO1BQ86YB8 467 aa14.84□□□□□ -0.03
COL7A1-201ENST00000328333 SARSP49591 514 aaKnown RBP14.83□□□□□ -0.03
COL7A1-201ENST00000328333 KLHL17Q6TDP4 642 aa14.83□□□□□ -0.03
COL7A1-201ENST00000328333 CCSER1Q9C0I3 900 aa14.83□□□□□ -0.03
COL7A1-201ENST00000328333 DHX35Q9H5Z1 703 aaKnown RBP14.83□□□□□ -0.03
COL7A1-201ENST00000328333 SORCS3Q9UPU3 1222 aa14.83□□□□□ -0.03
COL7A1-201ENST00000328333 COMMD3-BMI1R4GMX3 469 aa14.83□□□□□ -0.03
COL7A1-201ENST00000328333 CAVIN3Q969G5 261 aa14.83□□□□□ -0.03
COL7A1-201ENST00000328333 RMI1Q9H9A7 625 aa14.83□□□□□ -0.03
COL7A1-201ENST00000328333 EIF3LQ9Y262 564 aaKnown RBP14.83□□□□□ -0.03
COL7A1-201ENST00000328333 PRIM2P49643 509 aa14.83□□□□□ -0.04
COL7A1-201ENST00000328333 IRGCQ6NXR0 463 aa14.83□□□□□ -0.04
COL7A1-201ENST00000328333 URGCPQ8TCY9 931 aa14.83□□□□□ -0.04
COL7A1-201ENST00000328333 VTA1Q9NP79 307 aa14.83□□□□□ -0.04
COL7A1-201ENST00000328333 LATS2Q9NRM7 1088 aa14.83□□□□□ -0.04
COL7A1-201ENST00000328333 PDS5AQ29RF7 1337 aaKnown RBP14.83□□□□□ -0.04
COL7A1-201ENST00000328333 CD3EAPO15446 510 aaKnown RBP14.83□□□□□ -0.04
COL7A1-201ENST00000328333 ALOX5P09917 674 aa14.83□□□□□ -0.04
COL7A1-201ENST00000328333 S100A1P23297 94 aa14.83□□□□□ -0.04
COL7A1-201ENST00000328333 CCZ1BP86790 482 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms