RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 EPS8L1Q8TE68 723 aa19.98■□□□□ 0.79
EXOSC3-201ENST00000327304 FAXDC2Q96IV6 333 aa19.98■□□□□ 0.79
EXOSC3-201ENST00000327304 CISHQ9NSE2 258 aa19.98■□□□□ 0.79
EXOSC3-201ENST00000327304 PCDHB4Q9Y5E5 795 aa19.98■□□□□ 0.79
EXOSC3-201ENST00000327304 I3L4J1 428 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 TMEM253P0C7T8 217 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 KRT5P13647 590 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 PBX3P40426 434 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 SLC11A1P49279 550 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 SOWAHAQ2M3V2 549 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 ERCC6LQ2NKX8 1250 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 RSRC2Q7L4I2 434 aaKnown RBP19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 CWH43Q9H720 699 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 CYP3A43Q9HB55 503 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 NOCTQ9UK39 431 aaKnown RBP19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 SNX12Q9UMY4 172 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 SLC4A7Q9Y6M7 1214 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 V9GYY5 206 aaPredicted RBP19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 NRP1O14786 923 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 GJB5O95377 273 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 BRCC3P46736 316 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 AARSP49588 968 aaKnown RBP eCLIP19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 ELF2Q15723 593 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 TIGD5Q53EQ6 642 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 C9orf50Q5SZB4 431 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 TMEM270Q6UE05 265 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 GOLGA1Q92805 767 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 SENP8Q96LD8 212 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 YME1L1Q96TA2 773 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 MRPL45Q9BRJ2 306 aaKnown RBP19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 L1RE1Q9UN81 338 aa19.97■□□□□ 0.79
EXOSC3-201ENST00000327304 CYB561D2O14569 222 aa19.96■□□□□ 0.79
EXOSC3-201ENST00000327304 CYP26A1O43174 497 aa19.96■□□□□ 0.79
EXOSC3-201ENST00000327304 CALCAP01258 141 aa19.96■□□□□ 0.79
EXOSC3-201ENST00000327304 TCP1P17987 556 aaKnown RBP19.96■□□□□ 0.79
EXOSC3-201ENST00000327304 GALCP54803 685 aa19.96■□□□□ 0.79
EXOSC3-201ENST00000327304 BTG3Q14201 252 aaPredicted RBP19.96■□□□□ 0.79
EXOSC3-201ENST00000327304 RASIP1Q5U651 963 aa19.96■□□□□ 0.79
EXOSC3-201ENST00000327304 LIMS2Q7Z4I7 341 aa19.96■□□□□ 0.79
EXOSC3-201ENST00000327304 CMTR2Q8IYT2 770 aaKnown RBP19.96■□□□□ 0.79
EXOSC3-201ENST00000327304 TMEM175Q9BSA9 504 aa19.96■□□□□ 0.79
EXOSC3-201ENST00000327304 ISCUQ9H1K1 167 aa19.96■□□□□ 0.79
EXOSC3-201ENST00000327304 ACP6Q9NPH0 428 aa19.96■□□□□ 0.79
EXOSC3-201ENST00000327304 HMGXB4Q9UGU5 601 aa19.96■□□□□ 0.79
EXOSC3-201ENST00000327304 CNTN6Q9UQ52 1028 aa19.96■□□□□ 0.79
EXOSC3-201ENST00000327304 TMEM189-UBE2V1I3L0A0 370 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 NCANO14594 1321 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 PALMO75781 387 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 GALTP07902 379 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 GZMAP12544 262 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 PDE6CP51160 858 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 BCAR1P56945 870 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 CKAP4Q07065 602 aaKnown RBP19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 DSTYKQ6XUX3 929 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 HERC6Q8IVU3 1022 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 RBBP8NLQ8NC74 664 aaPredicted RBP19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 SLC20A1Q8WUM9 679 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 KBTBD7Q8WVZ9 684 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 CALR3Q96L12 384 aaKnown RBP19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 SLC9A7Q96T83 725 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 MARCH5Q9NX47 278 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 HYOU1Q9Y4L1 999 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 MRPL42Q9Y6G3 142 aaKnown RBP19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 CTAGE15A4D2H0 777 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 ANKRD62A6NC57 917 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 NT5C1B-RDH14C9J2C7 533 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 HUS1O60921 280 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 ALDH2P05091 517 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 CTAGE8P0CG41 777 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 CYP11B1P15538 503 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 ATP2A2P16615 1042 aaKnown RBP19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 ZNF132P52740 706 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 YWHAEP62258 255 aaKnown RBP19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 HTRA4P83105 476 aaPredicted RBP19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 INCA1Q0VD86 236 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 NOP9Q86U38 636 aaKnown RBP19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 CTAGE6Q86UF2 777 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 CTAGE4Q8IX94 777 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 PDCL2Q8N4E4 241 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 TOP6BLQ8N6T0 577 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 APPL2Q8NEU8 664 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 WHAMMQ8TF30 809 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 CTNNBL1Q8WYA6 563 aaPredicted RBP19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 RPGRIP1Q96KN7 1286 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 TWNKQ96RR1 684 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 ZBED2Q9BTP6 218 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 MTIF3Q9H2K0 278 aaKnown RBP19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 FAN1Q9Y2M0 1017 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 NME7Q9Y5B8 376 aa19.95■□□□□ 0.78
EXOSC3-201ENST00000327304 CILPO75339 1184 aa19.94■□□□□ 0.78
EXOSC3-201ENST00000327304 CHRNB2P17787 502 aa19.94■□□□□ 0.78
EXOSC3-201ENST00000327304 BPIFB4P59827 614 aa19.94■□□□□ 0.78
EXOSC3-201ENST00000327304 CDR2Q01850 454 aa19.94■□□□□ 0.78
EXOSC3-201ENST00000327304 ORC1Q13415 861 aa19.94■□□□□ 0.78
EXOSC3-201ENST00000327304 ZNF394Q53GI3 561 aa19.94■□□□□ 0.78
EXOSC3-201ENST00000327304 WSCD1Q658N2 575 aa19.94■□□□□ 0.78
EXOSC3-201ENST00000327304 MTERF4Q7Z6M4 381 aaKnown RBP19.94■□□□□ 0.78
EXOSC3-201ENST00000327304 SLC47A2Q86VL8 602 aa19.94■□□□□ 0.78
EXOSC3-201ENST00000327304 TMEM173Q86WV6 379 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms