RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 CKBP12277 381 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 ITGA4P13612 1032 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 PAK2Q13177 524 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 DSC3Q14574 896 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 MTFR1Q15390 333 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 ACOT1Q86TX2 421 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 RASGEF1CQ8N431 466 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 MMGT1Q8N4V1 131 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 SLC43A3Q8NBI5 491 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 UBA3Q8TBC4 463 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 ACTRT1Q8TDG2 376 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 CPXM1Q96SM3 734 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 AP1M1Q9BXS5 423 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 STARD7Q9NQZ5 370 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 TMEM59LQ9UK28 342 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 ARL5CA6NH57 179 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 KPNA7A9QM74 516 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 SEC31AO94979 1220 aaKnown RBP19.54■□□□□ 0.72
USP39-201ENST00000323701 LMO2P25791 158 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 FAM26DQ5JW98 314 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 TRIM11Q96F44 468 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 RPS6KC1Q96S38 1066 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 TSEN34Q9BSV6 310 aaKnown RBP19.54■□□□□ 0.72
USP39-201ENST00000323701 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.54■□□□□ 0.72
USP39-201ENST00000323701 LHX5Q9H2C1 402 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 PLEKHA4Q9H4M7 779 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 RNF14Q9UBS8 474 aa19.54■□□□□ 0.72
USP39-201ENST00000323701 CD4P01730 458 aa19.53■□□□□ 0.72
USP39-201ENST00000323701 LILRA4P59901 499 aa19.53■□□□□ 0.72
USP39-201ENST00000323701 SLC7A5Q01650 507 aa19.53■□□□□ 0.72
USP39-201ENST00000323701 RNF169Q8NCN4 708 aa19.53■□□□□ 0.72
USP39-201ENST00000323701 ADAM2Q99965 735 aa19.53■□□□□ 0.72
USP39-201ENST00000323701 PAAF1Q9BRP4 392 aa19.53■□□□□ 0.72
USP39-201ENST00000323701 NT5C1AQ9BXI3 368 aa19.53■□□□□ 0.72
USP39-201ENST00000323701 DMGDHQ9UI17 866 aaKnown RBP19.53■□□□□ 0.72
USP39-201ENST00000323701 RAB21Q9UL25 225 aa19.53■□□□□ 0.72
USP39-201ENST00000323701 SPOPO43791 374 aa19.53■□□□□ 0.72
USP39-201ENST00000323701 GPD2P43304 727 aa19.53■□□□□ 0.72
USP39-201ENST00000323701 SCNN1GP51170 649 aa19.53■□□□□ 0.72
USP39-201ENST00000323701 CDR1P51861 262 aa19.53■□□□□ 0.72
USP39-201ENST00000323701 OGDHQ02218 1023 aa19.53■□□□□ 0.72
USP39-201ENST00000323701 ZNF252P-AS1Q0IIN9 211 aa19.53■□□□□ 0.72
USP39-201ENST00000323701 LIN9Q5TKA1 542 aa19.53■□□□□ 0.72
USP39-201ENST00000323701 ERICH1Q86X53 443 aa19.53■□□□□ 0.72
USP39-201ENST00000323701 RNPC3Q96LT9 517 aaKnown RBP19.53■□□□□ 0.72
USP39-201ENST00000323701 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.53■□□□□ 0.723e-12■■□□□ 13.8
USP39-201ENST00000323701 FAM49BQ9NUQ9 324 aa19.53■□□□□ 0.72
USP39-201ENST00000323701 L1RE1Q9UN81 338 aa19.53■□□□□ 0.72
USP39-201ENST00000323701 LAMA2P24043 3122 aaKnown RBP19.53■□□□□ 0.72
USP39-201ENST00000323701 M0QYV0 167 aa19.52■□□□□ 0.72
USP39-201ENST00000323701 TULP2O00295 520 aa19.52■□□□□ 0.72
USP39-201ENST00000323701 FGGP02679 453 aa19.52■□□□□ 0.72
USP39-201ENST00000323701 PFKMP08237 780 aa19.52■□□□□ 0.72
USP39-201ENST00000323701 VDRP11473 427 aa19.52■□□□□ 0.72
USP39-201ENST00000323701 CCDC142Q17RM4 750 aa19.52■□□□□ 0.72
USP39-201ENST00000323701 PPP1R26Q5T8A7 1209 aaPredicted RBP19.52■□□□□ 0.72
USP39-201ENST00000323701 ADAT2Q7Z6V5 191 aaKnown RBP19.52■□□□□ 0.72
USP39-201ENST00000323701 MRPL10Q7Z7H8 261 aaKnown RBP19.52■□□□□ 0.72
USP39-201ENST00000323701 ZNF518BQ9C0D4 1074 aa19.52■□□□□ 0.72
USP39-201ENST00000323701 PRDM10Q9NQV6 1147 aa19.52■□□□□ 0.72
USP39-201ENST00000323701 MYO1FO00160 1098 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 PGRMC1O00264 195 aaKnown RBP19.51■□□□□ 0.71
USP39-201ENST00000323701 MED7O43513 233 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 ERBB2P04626 1255 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 PDGFRBP09619 1106 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 PYGMP11217 842 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 TCF4P15884 667 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 CTNNA1P35221 906 aaKnown RBP19.51■□□□□ 0.71
USP39-201ENST00000323701 LLGL1Q15334 1064 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 CNGA2Q16280 664 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 SGO2Q562F6 1265 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 PPP1R15BQ5SWA1 713 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 RTN4RL1Q86UN2 441 aaPredicted RBP19.51■□□□□ 0.71
USP39-201ENST00000323701 C3orf58Q8NDZ4 430 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 OR6B3Q8NGW1 331 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 CALR3Q96L12 384 aaKnown RBP19.51■□□□□ 0.71
USP39-201ENST00000323701 CARD9Q9H257 536 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 TSPAN16Q9UKR8 245 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 PIK3R2O00459 728 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 RPLP2P05387 115 aaKnown RBP19.51■□□□□ 0.71
USP39-201ENST00000323701 LRPAP1P30533 357 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 LIMS2Q7Z4I7 341 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 ZDHHC14Q8IZN3 488 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 MCEEQ96PE7 176 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 KRT12Q99456 494 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 SELENOOQ9BVL4 669 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 TSPYL2Q9H2G4 693 aaPredicted RBP19.51■□□□□ 0.71
USP39-201ENST00000323701 PARVAQ9NVD7 372 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 GDAP2Q9NXN4 497 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 PHF24Q9UPV7 400 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 PCDHA3Q9Y5H8 950 aa19.51■□□□□ 0.71
USP39-201ENST00000323701 A0A0U1RQF3 1178 aa19.5■□□□□ 0.71
USP39-201ENST00000323701 TMEM191CA6NGB0 347 aa19.5■□□□□ 0.71
USP39-201ENST00000323701 MIF4GDA9UHW6 222 aaKnown RBP19.5■□□□□ 0.71
USP39-201ENST00000323701 PROSCO94903 275 aa19.5■□□□□ 0.71
USP39-201ENST00000323701 MYBL2P10244 700 aa19.5■□□□□ 0.71
USP39-201ENST00000323701 TAF6P49848 677 aa19.5■□□□□ 0.71
USP39-201ENST00000323701 CLCNKBP51801 687 aa19.5■□□□□ 0.71
USP39-201ENST00000323701 PRMT2P55345 433 aa19.5■□□□□ 0.71
USP39-201ENST00000323701 TAS2R40P59535 323 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms