RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 EFTUD2Q15029 972 aaKnown RBP eCLIP8.35□□□□□ -1.07
RTL3-201ENST00000321110 TRIP10Q15642 601 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 ADRM1Q16186 407 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 SBK1Q52WX2 424 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 MAP3K21Q5TCX8 1036 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 USP17L2Q6R6M4 530 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 POTEGQ6S5H5 508 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 C3orf62Q6ZUJ4 267 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 MARVELD2Q8N4S9 558 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 DEPTORQ8TB45 409 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 REEP2Q9BRK0 252 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 RUSC1Q9BVN2 902 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 VPS37BQ9H9H4 285 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 SSU72Q9NP77 194 aaKnown RBP8.35□□□□□ -1.07
RTL3-201ENST00000321110 PSMC3IPQ9P2W1 217 aaPredicted RBP8.35□□□□□ -1.07
RTL3-201ENST00000321110 ZNF148Q9UQR1 794 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 BCS1LQ9Y276 419 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 TMED5Q9Y3A6 229 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 CAPN8A6NHC0 703 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 RSPH10B2B2RC85 870 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 SPECC1L-ADORA2AF8WAN1 911 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 PIK3CDO00329 1044 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 WDR46O15213 610 aaKnown RBP8.35□□□□□ -1.07
RTL3-201ENST00000321110 MED24O75448 989 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 RSPH10BP0C881 870 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 CDH2P19022 906 aaPredicted RBP8.35□□□□□ -1.07
RTL3-201ENST00000321110 BGNP21810 368 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 MAN1A1P33908 653 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 CPOXP36551 454 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 FDFT1P37268 417 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 STT3AP46977 705 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 RXRGP48443 463 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 VCPP55072 806 aaKnown RBP8.35□□□□□ -1.07
RTL3-201ENST00000321110 PSMC6P62333 389 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 CHRNDQ07001 517 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 PDIA2Q13087 525 aaKnown RBP8.35□□□□□ -1.07
RTL3-201ENST00000321110 GK3PQ14409 553 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 SEPT7Q16181 437 aaKnown RBP8.35□□□□□ -1.07
RTL3-201ENST00000321110 DNAL1Q4LDG9 190 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 ZNF804AQ7Z570 1209 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 TMEM110Q86TL2 294 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 ZNF410Q86VK4 478 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 TRIM50Q86XT4 487 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 PPM1KQ8N3J5 372 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 GLIS1Q8NBF1 620 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 SLC26A7Q8TE54 656 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 USP6NLQ92738 828 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 COA7Q96BR5 231 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 NSUN4Q96CB9 384 aaKnown RBP8.35□□□□□ -1.07
RTL3-201ENST00000321110 BTBD9Q96Q07 612 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 MRPL1Q9BYD6 325 aaKnown RBP8.35□□□□□ -1.07
RTL3-201ENST00000321110 CRNKL1Q9BZJ0 848 aaKnown RBP8.35□□□□□ -1.07
RTL3-201ENST00000321110 LIN28AQ9H9Z2 209 aaKnown RBP8.35□□□□□ -1.07
RTL3-201ENST00000321110 MCM9Q9NXL9 1143 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 TAGLN3Q9UI15 199 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 PCDHA12Q9UN75 941 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 CEPT1Q9Y6K0 416 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 ROBO1Q9Y6N7 1651 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 KDM3AQ9Y4C1 1321 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 NHSL1Q5SYE7 1610 aa8.35□□□□□ -1.07
RTL3-201ENST00000321110 ESYT2A0FGR8 921 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 F5H6K3 240 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 EML1O00423 815 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 ADAM23O75077 832 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 KLRC2P26717 231 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 STIP1P31948 543 aaKnown RBP8.34□□□□□ -1.07
RTL3-201ENST00000321110 STAT3P40763 770 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 PSMD7P51665 324 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 NCKAP1LP55160 1127 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 RPL26P61254 145 aaKnown RBP8.34□□□□□ -1.07
RTL3-201ENST00000321110 MYBPC1Q00872 1141 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 PLCB3Q01970 1234 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 ACAP1Q15027 740 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 ZYXQ15942 572 aaKnown RBP8.34□□□□□ -1.07
RTL3-201ENST00000321110 CCDC142Q17RM4 750 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 PDCD4Q53EL6 469 aaKnown RBP8.34□□□□□ -1.07
RTL3-201ENST00000321110 HSP90AA5PQ58FG0 334 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 EFHC1Q5JVL4 640 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 RC3H1Q5TC82 1133 aaKnown RBP8.34□□□□□ -1.07
RTL3-201ENST00000321110 BANPQ8N9N5 519 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 ATP11CQ8NB49 1132 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 SLC44A5Q8NCS7 719 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 PLEKHO2Q8TD55 490 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 MZB1Q8WU39 189 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 GFM2Q969S9 779 aaKnown RBP8.34□□□□□ -1.07
RTL3-201ENST00000321110 HNRNPABQ99729 332 aaKnown RBP8.34□□□□□ -1.07
RTL3-201ENST00000321110 HEMGNQ9BXL5 484 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 MRPS26Q9BYN8 205 aaKnown RBP8.34□□□□□ -1.07
RTL3-201ENST00000321110 PPARGC1AQ9UBK2 798 aaKnown RBP8.34□□□□□ -1.07
RTL3-201ENST00000321110 APPL1Q9UKG1 709 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 FAF1Q9UNN5 650 aaPredicted RBP8.34□□□□□ -1.07
RTL3-201ENST00000321110 DOLKQ9UPQ8 538 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 NUP98P52948 1817 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 ARHGAP10A1A4S6 786 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 FBP2O00757 339 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 DENRO43583 198 aaKnown RBP8.34□□□□□ -1.07
RTL3-201ENST00000321110 DNAJA2O60884 412 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 BANF1O75531 89 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 TFPTP0C1Z6 253 aa8.34□□□□□ -1.07
RTL3-201ENST00000321110 GSTT2P0CG29 244 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms