RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 SOAT1P35610 550 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 NUDT18Q6ZVK8 323 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 KIF12Q96FN5 646 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 SPON2Q9BUD6 331 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 HOXC10Q9NYD6 342 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 KRT6BP04259 564 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 GRIK1P39086 918 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 KRT6CP48668 564 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 POU4F1Q01851 419 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 RNPEPQ9H4A4 650 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 COL23A1Q86Y22 540 aaPredicted RBP17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 CPA5Q8WXQ8 436 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 DBNDD1Q9H9R9 158 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 SPATA31E1Q6ZUB1 1445 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 ZC3H4Q9UPT8 1303 aaKnown RBP17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 ITGA8P53708 1063 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 AGAP3Q96P47 875 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 ERVK-7P63135 1459 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 DPYSL4O14531 572 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 ZBTB39O15060 712 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 EIF2B2P49770 351 aaKnown RBP17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 USPL1Q5W0Q7 1092 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 METTL16Q86W50 562 aaKnown RBP17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 SEC31BQ9NQW1 1179 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 WEE2P0C1S8 567 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 GYS1P13807 737 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 SYCP2LQ5T4T6 812 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 C11orf88Q6PI97 169 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 OXER1Q8TDS5 423 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 JPH1Q9HDC5 661 aaPredicted RBP17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 HSD17B3P37058 310 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 COX10Q12887 443 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 PDIA5Q14554 519 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 CACNA2D2Q9NY47 1150 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 ADGRF4Q8IZF3 695 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 KPNA4O00629 521 aaPredicted RBP17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 ZBTB22O15209 634 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 KRT20P35900 424 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 SHC4Q6S5L8 630 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 CYB5R4Q7L1T6 521 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 C6orf203Q9P0P8 240 aaPredicted RBP17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 HPS5Q9UPZ3 1129 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 PSTPIP1O43586 416 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 SLC29A2Q14542 456 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 SLC30A5Q8TAD4 765 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 TMEM47Q9BQJ4 181 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 GABBR1Q9UBS5 961 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 ADGRL3Q9HAR2 1447 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 NPM3O75607 178 aaKnown RBP17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 RIN3Q8TB24 985 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 SYN2Q92777 582 aaPredicted RBP17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 PIH1D3Q9NQM4 214 aaKnown RBP17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 GJB4Q9NTQ9 266 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 TRIQKQ629K1 86 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 ARHGAP27Q6ZUM4 889 aa17.56■□□□□ 0.4
SMCHD1-201ENST00000320876 CAMSAP1Q5T5Y3 1602 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 HEG1Q9ULI3 1381 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 MOCS2O96007 188 aaPredicted RBP17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 SERPINB5P36952 375 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 CYP51A1Q16850 503 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 GH2P01242 217 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 PRIM2P49643 509 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 TMEM117Q9H0C3 514 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 ATAD3AQ9NVI7 634 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 TRMT5Q32P41 509 aaKnown RBP17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 ARMC4Q5T2S8 1044 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 EEF2KO00418 725 aaKnown RBP17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 UCHL3P15374 230 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 GALCP54803 685 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 CHP1Q99653 195 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 EFCAB1Q9HAE3 211 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 SMIM31A0A1B0GVY4 71 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 ANXA11P50995 505 aaKnown RBP17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 VEPH1Q14D04 833 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 TAF2Q6P1X5 1199 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 FAM45AQ8TCE6 357 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 AGAP9Q5VTM2 703 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 CENPLQ8N0S6 344 aaPredicted RBP17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 MMGT1Q8N4V1 131 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 CATSPERBQ9H7T0 1116 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 CHRNB3Q05901 458 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 ARMC3Q5W041 872 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 SNRNP48Q6IEG0 339 aaKnown RBP17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 NLRP9Q7RTR0 991 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 KRT78Q8N1N4 520 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 ANKRD49Q8WVL7 239 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 RAD21L1Q9H4I0 556 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 BCORL1Q5H9F3 1711 aa17.55■□□□□ 0.4
SMCHD1-201ENST00000320876 CENPXA8MT69 81 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 SERPINB8P50452 374 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 SHROOM1Q2M3G4 852 aaPredicted RBP17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 RCSD1Q6JBY9 416 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 NEK10Q6ZWH5 1172 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 FAM9CQ8IZT9 166 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 C7orf25Q9BPX7 421 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 ZBED2Q9BTP6 218 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 SERHL2Q9H4I8 314 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 SERHLQ9NQF3 203 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 IQGAP3Q86VI3 1631 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 FNTAP49354 379 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms