RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 FBXO6Q9NRD1 293 aaPredicted RBP16.9■□□□□ 0.3
CRAT-201ENST00000318080 MYPNQ86TC9 1320 aa16.9■□□□□ 0.3
CRAT-201ENST00000318080 hCG_2014768A0A024R1R8 64 aa16.9■□□□□ 0.3
CRAT-201ENST00000318080 ZBED4O75132 1171 aa16.9■□□□□ 0.3
CRAT-201ENST00000318080 YARSP54577 528 aaKnown RBP16.9■□□□□ 0.3
CRAT-201ENST00000318080 MKRN3Q13064 507 aaKnown RBP16.9■□□□□ 0.3
CRAT-201ENST00000318080 PPP1R21Q6ZMI0 780 aa16.9■□□□□ 0.3
CRAT-201ENST00000318080 C4orf50Q6ZRC1 276 aa16.9■□□□□ 0.3
CRAT-201ENST00000318080 NLRP9Q7RTR0 991 aa16.9■□□□□ 0.3
CRAT-201ENST00000318080 C12orf56Q8IXR9 622 aa16.9■□□□□ 0.3
CRAT-201ENST00000318080 IFT43Q96FT9 208 aa16.9■□□□□ 0.3
CRAT-201ENST00000318080 AGBL1Q96MI9 1066 aa16.9■□□□□ 0.3
CRAT-201ENST00000318080 TEPSINQ96N21 525 aa16.9■□□□□ 0.3
CRAT-201ENST00000318080 SCOCQ9UIL1 159 aa16.9■□□□□ 0.3
CRAT-201ENST00000318080 UMODL1Q5DID0 1318 aa16.9■□□□□ 0.3
CRAT-201ENST00000318080 A0A0G2JND7 137 aa16.89■□□□□ 0.3
CRAT-201ENST00000318080 KRT15P19012 456 aa16.89■□□□□ 0.3
CRAT-201ENST00000318080 KLRC2P26717 231 aa16.89■□□□□ 0.3
CRAT-201ENST00000318080 PIK3CAP42336 1068 aa16.89■□□□□ 0.3
CRAT-201ENST00000318080 PSMC4P43686 418 aa16.89■□□□□ 0.3
CRAT-201ENST00000318080 LBRQ14739 615 aaKnown RBP16.89■□□□□ 0.3
CRAT-201ENST00000318080 MDH1BQ5I0G3 518 aa16.89■□□□□ 0.3
CRAT-201ENST00000318080 NBPF12Q5TAG4 269 aaPredicted RBP16.89■□□□□ 0.3
CRAT-201ENST00000318080 SPOPLQ6IQ16 392 aa16.89■□□□□ 0.3
CRAT-201ENST00000318080 SLC39A4Q6P5W5 647 aa16.89■□□□□ 0.3
CRAT-201ENST00000318080 ARHGAP22Q7Z5H3 698 aa16.89■□□□□ 0.3
CRAT-201ENST00000318080 GPC2Q8N158 579 aa16.89■□□□□ 0.3
CRAT-201ENST00000318080 FBXL13Q8NEE6 735 aa16.89■□□□□ 0.3
CRAT-201ENST00000318080 ACSF2Q96CM8 615 aaPredicted RBP16.89■□□□□ 0.3
CRAT-201ENST00000318080 PLVAPQ9BX97 442 aa16.89■□□□□ 0.3
CRAT-201ENST00000318080 GLIS2Q9BZE0 524 aaPredicted RBP16.89■□□□□ 0.3
CRAT-201ENST00000318080 TRABDQ9H4I3 376 aa16.89■□□□□ 0.3
CRAT-201ENST00000318080 NPM3O75607 178 aaKnown RBP16.89■□□□□ 0.29
CRAT-201ENST00000318080 P4HBP07237 508 aaKnown RBP16.89■□□□□ 0.29
CRAT-201ENST00000318080 MARK3P27448 753 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 DSG3P32926 999 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 GPC3P51654 580 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 GAD2Q05329 585 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 STAT4Q14765 748 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 PDCD2Q16342 344 aaPredicted RBP16.89■□□□□ 0.29
CRAT-201ENST00000318080 MAPK6Q16659 721 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 TTC7BQ86TV6 843 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 SCYL3Q8IZE3 742 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 ANKRD35Q8N283 1001 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 HAUS1Q96CS2 278 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 C11orf70Q9BRQ4 267 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 OSBPL8Q9BZF1 889 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 GGA3Q9NZ52 723 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 KANSL3Q9P2N6 904 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 DICER1Q9UPY3 1922 aaKnown RBP16.89■□□□□ 0.29
CRAT-201ENST00000318080 POLR2AP24928 1970 aaKnown RBP16.89■□□□□ 0.29
CRAT-201ENST00000318080 CA4P22748 312 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 YWHABP31946 246 aaKnown RBP16.89■□□□□ 0.29
CRAT-201ENST00000318080 WNT7BP56706 349 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 CCDC15Q0P6D6 951 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 SCARA3Q6AZY7 606 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 SHKBP1Q8TBC3 707 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 GRK7Q8WTQ7 553 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 VTI1AQ96AJ9 217 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 DEFB129Q9H1M3 183 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 DNPEPQ9ULA0 475 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 STARD13Q9Y3M8 1113 aa16.89■□□□□ 0.29
CRAT-201ENST00000318080 GOLGA8SH3BPF8 625 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 GOLGA8MH3BSY2 632 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 AMPD1P23109 780 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 VHLP40337 213 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 NOP14P78316 857 aaKnown RBP16.88■□□□□ 0.29
CRAT-201ENST00000318080 CUL3Q13618 768 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 SGSM1Q2NKQ1 1148 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 RINLQ6ZS11 566 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 LDHDQ86WU2 507 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 BSNDQ8WZ55 320 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 MAK16Q9BXY0 300 aaKnown RBP16.88■□□□□ 0.29
CRAT-201ENST00000318080 C10orf88Q9H8K7 445 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 TMEM8AQ9HCN3 771 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 ARMCX1Q9P291 453 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 COQ4Q9Y3A0 265 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 USP1O94782 785 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 GSTT1P30711 240 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 PRKG1Q13976 671 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 EFTUD2Q15029 972 aaKnown RBP eCLIP16.88■□□□□ 0.29
CRAT-201ENST00000318080 LRRC74BQ6ZQY2 392 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 SYDE1Q6ZW31 735 aaPredicted RBP16.88■□□□□ 0.29
CRAT-201ENST00000318080 FBXO27Q8NI29 283 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 ZNF516Q92618 1163 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 RBM41Q96IZ5 413 aaKnown RBP16.88■□□□□ 0.29
CRAT-201ENST00000318080 CYTH2Q99418 400 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 MOV10L1Q9BXT6 1211 aaKnown RBP16.88■□□□□ 0.29
CRAT-201ENST00000318080 VCXQ9H320 206 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 DCLRE1BQ9H816 532 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 TBX20Q9UMR3 447 aa16.88■□□□□ 0.29
CRAT-201ENST00000318080 NFIBO00712 420 aa16.87■□□□□ 0.29
CRAT-201ENST00000318080 EDF1O60869 148 aaKnown RBP16.87■□□□□ 0.29
CRAT-201ENST00000318080 MUTP22033 750 aa16.87■□□□□ 0.29
CRAT-201ENST00000318080 CAV1Q03135 178 aa16.87■□□□□ 0.29
CRAT-201ENST00000318080 DGKZQ13574 1117 aa16.87■□□□□ 0.29
CRAT-201ENST00000318080 MTMR2Q13614 643 aa16.87■□□□□ 0.29
CRAT-201ENST00000318080 CCNG2Q16589 344 aa16.87■□□□□ 0.29
CRAT-201ENST00000318080 IRGCQ6NXR0 463 aa16.87■□□□□ 0.29
CRAT-201ENST00000318080 TMEM161BQ8NDZ6 487 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms