RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 CDKL3Q8IVW4 592 aaPredicted RBP11.29□□□□□ -0.6
HNF4A-201ENST00000316099 DNERQ8NFT8 737 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 RNF25Q96BH1 459 aaPredicted RBP11.29□□□□□ -0.6
HNF4A-201ENST00000316099 FAM193BQ96PV7 902 aaPredicted RBP11.29□□□□□ -0.6
HNF4A-201ENST00000316099 CYP39A1Q9NYL5 469 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 GTSE1Q9NYZ3 720 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 TBX20Q9UMR3 447 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 PSMC1P62191 440 aaKnown RBP11.29□□□□□ -0.6
HNF4A-201ENST00000316099 KCNA1Q09470 495 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 LONRF1Q17RB8 773 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 MAP1SQ66K74 1059 aaPredicted RBP11.29□□□□□ -0.6
HNF4A-201ENST00000316099 THNSL1Q8IYQ7 743 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 PBXIP1Q96AQ6 731 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 KDM4CQ9H3R0 1056 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 STX18Q9P2W9 335 aaKnown RBP11.29□□□□□ -0.6
HNF4A-201ENST00000316099 AGO2Q9UKV8 859 aaKnown RBP11.29□□□□□ -0.6
HNF4A-201ENST00000316099 SATB2Q9UPW6 733 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 CARSP49589 748 aaKnown RBP11.29□□□□□ -0.6
HNF4A-201ENST00000316099 SEC24CP53992 1094 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 TBCCQ15814 346 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 SLC35G2Q8TBE7 412 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 UPF1Q92900 1129 aaKnown RBP eCLIP11.29□□□□□ -0.62e-7■■■□□ 18.5
HNF4A-201ENST00000316099 UVRAGQ9P2Y5 699 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 MAGED2Q9UNF1 606 aaPredicted RBP11.29□□□□□ -0.6
HNF4A-201ENST00000316099 KRT4P19013 534 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 ALDH5A1P51649 535 aaPredicted RBP11.29□□□□□ -0.6
HNF4A-201ENST00000316099 OR2W6PQ8NHA6 318 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 CLEC4DQ8WXI8 215 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 ANKRD27Q96NW4 1050 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 C11orf70Q9BRQ4 267 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 IL10P22301 178 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 PON1P27169 355 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 SSTR3P32745 418 aaPredicted RBP11.29□□□□□ -0.6
HNF4A-201ENST00000316099 ARSEP51690 589 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 TMEM259Q4ZIN3 620 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 RABGAP1LQ5R372 815 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 KLHDC7AQ5VTJ3 777 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 MYCBPAPQ8TBZ2 947 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 CMTM5Q96DZ9 223 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 KCNK16Q96T55 309 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 SYT17Q9BSW7 474 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 FGFBP2Q9BYJ0 223 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 NPHS2Q9NP85 383 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 IGLV3-22A0A075B6J6 115 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 H3BRJ5 948 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 CXCL11O14625 94 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 DEAF1O75398 565 aaPredicted RBP11.28□□□□□ -0.6
HNF4A-201ENST00000316099 E2F6O75461 281 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 NQO1P15559 274 aaKnown RBP11.28□□□□□ -0.6
HNF4A-201ENST00000316099 KPNB1Q14974 876 aaKnown RBP11.28□□□□□ -0.6
HNF4A-201ENST00000316099 FBXO16Q8IX29 292 aaPredicted RBP11.28□□□□□ -0.6
HNF4A-201ENST00000316099 RNF149Q8NC42 400 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 THAP11Q96EK4 314 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 HSD17B14Q9BPX1 270 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 MKNK1Q9BUB5 465 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 CCDC134Q9H6E4 229 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 APEX2Q9UBZ4 518 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 L1RE1Q9UN81 338 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 ATP8B3O60423 1300 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 PRLRP16471 622 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 ACOT2P49753 483 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 ALDH18A1P54886 795 aaKnown RBP11.28□□□□□ -0.6
HNF4A-201ENST00000316099 JAMLQ86YT9 394 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 SIX6OS1Q8N1H7 587 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 DTX3LQ8TDB6 740 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 CLMNQ96JQ2 1002 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 STK33Q9BYT3 514 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 TMEM120BA0PK00 339 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 PIK3R2O00459 728 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 ATP9AO75110 1047 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 NPTX2P47972 431 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 LY6KQ17RY6 165 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 MIIPQ5JXC2 388 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 C16orf89Q6UX73 402 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 RPF1Q9H9Y2 349 aaKnown RBP11.28□□□□□ -0.6
HNF4A-201ENST00000316099 UBN1Q9NPG3 1134 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 PARVAQ9NVD7 372 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 SUCLA2Q9P2R7 463 aaPredicted RBP11.28□□□□□ -0.6
HNF4A-201ENST00000316099 HSD17B3P37058 310 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 AARSP49588 968 aaKnown RBP eCLIP11.28□□□□□ -0.6
HNF4A-201ENST00000316099 NCLNQ969V3 563 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 CBWD1Q9BRT8 395 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 MRPL4Q9BYD3 311 aaKnown RBP11.28□□□□□ -0.6
HNF4A-201ENST00000316099 LRRC4Q9HBW1 653 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 RBAKQ9NYW8 714 aaPredicted RBP11.28□□□□□ -0.6
HNF4A-201ENST00000316099 IGSF9BQ9UPX0 1349 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 KLHL2O95198 593 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 SCTRP47872 440 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 CTCFP49711 727 aaPredicted RBP11.28□□□□□ -0.6
HNF4A-201ENST00000316099 RFX8Q6ZV50 586 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 RSRC2Q7L4I2 434 aaKnown RBP11.28□□□□□ -0.6
HNF4A-201ENST00000316099 VSIG10LQ86VR7 867 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 RCOR2Q8IZ40 523 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 RPS6KC1Q96S38 1066 aa11.28□□□□□ -0.6
HNF4A-201ENST00000316099 LTBP3Q9NS15 1303 aa11.27□□□□□ -0.6
HNF4A-201ENST00000316099 GTF2A2P52657 109 aa11.27□□□□□ -0.6
HNF4A-201ENST00000316099 ITGB3BPQ13352 177 aaPredicted RBP11.27□□□□□ -0.6
HNF4A-201ENST00000316099 ZNF568Q3ZCX4 644 aa11.27□□□□□ -0.6
HNF4A-201ENST00000316099 LRRC71Q8N4P6 559 aa11.27□□□□□ -0.6
HNF4A-201ENST00000316099 TMBIM4Q9HC24 238 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms