RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 HACD3Q9P035 362 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 SHPRHQ149N8 1683 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 SLC25A27O95847 323 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 POLBP06746 335 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 NAMPTP43490 491 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 KLC1Q07866 573 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 TMEM62Q0P6H9 643 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 IMPG1Q17R60 797 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 SV2AQ7L0J3 742 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 CREG2Q8IUH2 290 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 ARHGAP18Q8N392 663 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 USP33Q8TEY7 942 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 MTMR12Q9C0I1 747 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 NOD2Q9HC29 1040 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 GAS2O43903 313 aaKnown RBP14.39□□□□□ -0.11
SPAST-201ENST00000315285 PROSCO94903 275 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 KLHL2O95198 593 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 CYP24A1Q07973 514 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 TFDP3Q5H9I0 405 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 ANGPTL8Q6UXH0 198 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 SAMD7Q7Z3H4 446 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 C4orf19Q8IY42 314 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 ASAP3Q8TDY4 903 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 GCNAQ96QF7 691 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 YY1AP1Q9H869 796 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 WARS2Q9UGM6 360 aaKnown RBP14.39□□□□□ -0.11
SPAST-201ENST00000315285 DYNC1LI2O43237 492 aaPredicted RBP14.39□□□□□ -0.11
SPAST-201ENST00000315285 NFKBIAP25963 317 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 CACNB2Q08289 660 aaPredicted RBP14.39□□□□□ -0.11
SPAST-201ENST00000315285 MROH9Q5TGP6 573 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 KCNK18Q7Z418 384 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 SPDYE1Q8NFV5 336 aaPredicted RBP14.39□□□□□ -0.11
SPAST-201ENST00000315285 KCNK16Q96T55 309 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 TASP1Q9H6P5 420 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 PHTF1Q9UMS5 762 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 FAM86B1E9PN63 330 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 NFIBO00712 420 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 PSMD3O43242 534 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 FAM86B2P0C5J1 330 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 DCAF6Q58WW2 860 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 LRRC6Q86X45 466 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 AENQ8WTP8 325 aaKnown RBP14.39□□□□□ -0.11
SPAST-201ENST00000315285 PTPRN2Q92932 1015 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 NSL1Q96IY1 281 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 PPME1Q9Y570 386 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 AARSP49588 968 aaKnown RBP eCLIP14.39□□□□□ -0.11
SPAST-201ENST00000315285 ARHGDIAP52565 204 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 ERVK-9P63128 1117 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 CHI3L2Q15782 390 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 PCNX4Q63HM2 1172 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 ARID3BQ8IVW6 561 aaPredicted RBP14.39□□□□□ -0.11
SPAST-201ENST00000315285 ATPAF2Q8N5M1 289 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 CATSPER1Q8NEC5 780 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 ARMC2Q8NEN0 867 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 RMDN1Q96DB5 314 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 RMDN2Q96LZ7 410 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 ABT1Q9ULW3 272 aaKnown RBP14.39□□□□□ -0.11
SPAST-201ENST00000315285 SLC4A7Q9Y6M7 1214 aa14.39□□□□□ -0.11
SPAST-201ENST00000315285 LRRC36Q1X8D7 754 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 SLC30A10Q6XR72 485 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 DNAJC9Q8WXX5 260 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 FAM111AQ96PZ2 611 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 EGFL8Q99944 293 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 SEMA4AQ9H3S1 761 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 ARHGAP10A1A4S6 786 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 ANP32DO95626 131 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 GFAPP14136 432 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 SCTRP47872 440 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 KCNT1Q5JUK3 1230 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 EFHC1Q5JVL4 640 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 ZBTB41Q5SVQ8 909 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 FAXCQ5TGI0 409 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 ZNF526Q8TF50 670 aaPredicted RBP14.38□□□□□ -0.11
SPAST-201ENST00000315285 FRMD8P1Q9BZ68 369 aaPredicted RBP14.38□□□□□ -0.11
SPAST-201ENST00000315285 CES2O00748 559 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 SUPT20HL2P0C7V6 817 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 ENO3P13929 434 aaPredicted RBP14.38□□□□□ -0.11
SPAST-201ENST00000315285 CPB1P15086 417 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 TAL1P17542 331 aaPredicted RBP14.38□□□□□ -0.11
SPAST-201ENST00000315285 RPS12P25398 132 aaKnown RBP14.38□□□□□ -0.11
SPAST-201ENST00000315285 RECQLP46063 649 aaPredicted RBP14.38□□□□□ -0.11
SPAST-201ENST00000315285 MED21Q13503 144 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 EXD1Q8NHP7 514 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 MAGEB18Q96M61 343 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 CGRRF1Q99675 332 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 C20orf96Q9NUD7 363 aaPredicted RBP14.38□□□□□ -0.11
SPAST-201ENST00000315285 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.38□□□□□ -0.112e-6■■■■■ 28.7
SPAST-201ENST00000315285 SIK3Q9Y2K2 1263 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 SMIM22K7EJ46 135 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 DDX3XO00571 662 aaKnown RBP eCLIP14.38□□□□□ -0.112e-7■■■■□ 20
SPAST-201ENST00000315285 FAM153BP0C7A2 387 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 MYL2P10916 166 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 TARSP26639 723 aaKnown RBP14.38□□□□□ -0.11
SPAST-201ENST00000315285 GRIK1P39086 918 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 HADHAP40939 763 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 MCL1Q07820 350 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 OVGP1Q12889 678 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 CNGA3Q16281 694 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 CCNG2Q16589 344 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 FAM153CQ494X1 144 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms