RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 NDST1P52848 882 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 PDIA2Q13087 525 aaKnown RBP14.38□□□□□ -0.11
DDX54-202ENST00000314045 PTGISQ16647 500 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 MAP7D1Q3KQU3 841 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 PHLDB3Q6NSJ2 640 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 MTHFD1LQ6UB35 978 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 ACSF2Q96CM8 615 aaPredicted RBP14.38□□□□□ -0.11
DDX54-202ENST00000314045 ACO2Q99798 780 aaKnown RBP14.38□□□□□ -0.11
DDX54-202ENST00000314045 RNPEPQ9H4A4 650 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 RSAD1Q9HA92 442 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 TRPV2Q9Y5S1 764 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 A0A0A6YYK5 440 aaPredicted RBP14.37□□□□□ -0.11
DDX54-202ENST00000314045 LSM8O95777 96 aaKnown RBP14.37□□□□□ -0.11
DDX54-202ENST00000314045 JAMLQ86YT9 394 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 PPTC7Q8NI37 304 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 HASPINQ8TF76 798 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 ZNF512Q96ME7 567 aaPredicted RBP14.37□□□□□ -0.11
DDX54-202ENST00000314045 CELF4Q9BZC1 486 aaKnown RBP14.37□□□□□ -0.11
DDX54-202ENST00000314045 RNF19AQ9NV58 838 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.37□□□□□ -0.11
DDX54-202ENST00000314045 ZNF536O15090 1300 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 MROH7Q68CQ1 1323 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 MYH14Q7Z406 1995 aaKnown RBP14.37□□□□□ -0.11
DDX54-202ENST00000314045 USP54Q70EL1 1684 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 LOC102724159A0A0B4J2E5 919 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 NCAM1P13591 858 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 BYSLQ13895 437 aaKnown RBP14.37□□□□□ -0.11
DDX54-202ENST00000314045 PWP2Q15269 919 aaKnown RBP14.37□□□□□ -0.11
DDX54-202ENST00000314045 ZKSCAN8Q15776 578 aaPredicted RBP14.37□□□□□ -0.11
DDX54-202ENST00000314045 NOP9Q86U38 636 aaKnown RBP14.37□□□□□ -0.11
DDX54-202ENST00000314045 MMGT1Q8N4V1 131 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 SMYD2Q9NRG4 433 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 BFARQ9NZS9 450 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 HES2Q9Y543 173 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 NWD2Q9ULI1 1742 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 ZBTB22O15209 634 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 KCNN4O15554 427 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 NT5DC4Q86YG4 428 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 ZBED8Q8IZ13 594 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 SPATA18Q8TC71 538 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 BRI3BPQ8WY22 251 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 TMEM169Q96HH4 297 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 TTC25Q96NG3 672 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 RNF208Q9H0X6 261 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 TLK1Q9UKI8 766 aa14.37□□□□□ -0.11
DDX54-202ENST00000314045 TIMM13Q9Y5L4 95 aaPredicted RBP14.37□□□□□ -0.11
DDX54-202ENST00000314045 PPP1R12AO14974 1030 aaPredicted RBP14.36□□□□□ -0.11
DDX54-202ENST00000314045 B4GALT5O43286 388 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 PRKCIP41743 596 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 BCAT1P54687 386 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 DDX42Q86XP3 938 aaKnown RBP eCLIP14.36□□□□□ -0.11
DDX54-202ENST00000314045 EMC1Q8N766 993 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 GANQ9H2C0 597 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 ACP6Q9NPH0 428 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 PQBP1O60828 265 aaKnown RBP14.36□□□□□ -0.11
DDX54-202ENST00000314045 KRT37O76014 449 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 PRKAR2AP13861 404 aaKnown RBP14.36□□□□□ -0.11
DDX54-202ENST00000314045 CARSP49589 748 aaKnown RBP14.36□□□□□ -0.11
DDX54-202ENST00000314045 WDR59Q6PJI9 974 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 MCOLN2Q8IZK6 566 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 SH3TC2Q8TF17 1288 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 DDX27Q96GQ7 796 aaKnown RBP14.36□□□□□ -0.11
DDX54-202ENST00000314045 GAD1Q99259 594 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 CNOT10Q9H9A5 744 aaKnown RBP14.36□□□□□ -0.11
DDX54-202ENST00000314045 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.36□□□□□ -0.11
DDX54-202ENST00000314045 TJP2Q9UDY2 1190 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 HPCAL4Q9UM19 191 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 HMBSP08397 361 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 ZACNQ401N2 412 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 CCDC62Q6P9F0 684 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 SYDE1Q6ZW31 735 aaPredicted RBP14.36□□□□□ -0.11
DDX54-202ENST00000314045 CEP120Q8N960 986 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 RAB3IL1Q8TBN0 382 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 BSNDQ8WZ55 320 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 BAP1Q92560 729 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 FSD1LQ9BXM9 530 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 PRRG1O14668 218 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 PROSCO94903 275 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 TNFSF9P41273 254 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 GYS2P54840 703 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 C1QBPQ07021 282 aaKnown RBP14.36□□□□□ -0.11
DDX54-202ENST00000314045 C12orf56Q8IXR9 622 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 OR5B17Q8NGF7 314 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 DEPDC1BQ8WUY9 529 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 ERP44Q9BS26 406 aa14.36□□□□□ -0.11
DDX54-202ENST00000314045 DHX33Q9H6R0 707 aaKnown RBP14.36□□□□□ -0.11
DDX54-202ENST00000314045 ZCCHC17Q9NP64 241 aaKnown RBP14.36□□□□□ -0.11
DDX54-202ENST00000314045 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.36□□□□□ -0.11
DDX54-202ENST00000314045 IQANK1A0A1B0GTG1 560 aa14.35□□□□□ -0.11
DDX54-202ENST00000314045 RAB27AP51159 221 aa14.35□□□□□ -0.11
DDX54-202ENST00000314045 ITPRIPL1Q6GPH6 555 aa14.35□□□□□ -0.11
DDX54-202ENST00000314045 C10orf67Q8IYJ2 551 aa14.35□□□□□ -0.11
DDX54-202ENST00000314045 EPS8L1Q8TE68 723 aa14.35□□□□□ -0.11
DDX54-202ENST00000314045 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.35□□□□□ -0.118e-7■■■■■ 50.8
DDX54-202ENST00000314045 L3MBTL3Q96JM7 780 aaPredicted RBP14.35□□□□□ -0.11
DDX54-202ENST00000314045 FAM84AQ96KN4 292 aa14.35□□□□□ -0.11
DDX54-202ENST00000314045 RAB6BQ9NRW1 208 aa14.35□□□□□ -0.11
DDX54-202ENST00000314045 C2CD2LO14523 706 aa14.35□□□□□ -0.11
DDX54-202ENST00000314045 LHX1P48742 406 aa14.35□□□□□ -0.11
DDX54-202ENST00000314045 KCNT1Q5JUK3 1230 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms