RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 DPY19L2Q6NUT2 758 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 LEMD2Q8NC56 503 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 SETD9Q8NE22 299 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 SPIRE2Q8WWL2 714 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 BDH2Q9BUT1 245 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 ACAD9Q9H845 621 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 STK39Q9UEW8 545 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 CORO1CQ9ULV4 474 aaPredicted RBP9.2□□□□□ -0.94
COL6A5-202ENST00000312481 COMMD3-BMI1R4GMX3 469 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 EMSYQ7Z589 1322 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 TNS2Q63HR2 1409 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 TTC3P53804 2025 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 RNF103-CHMP3A0A140T963 221 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 RRN3P2A6NIE6 340 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 MPOP05164 745 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 MYL2P10916 166 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 ACTR2P61160 394 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 RUNX1T1Q06455 604 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 FAM92BQ6ZTR7 304 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 SFR1Q86XK3 245 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 METTL13Q8N6R0 699 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 ARHGEF1Q92888 912 aaKnown RBP9.2□□□□□ -0.94
COL6A5-202ENST00000312481 EME1Q96AY2 570 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 ZNF184Q99676 751 aaPredicted RBP9.2□□□□□ -0.94
COL6A5-202ENST00000312481 NCANO14594 1321 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 LAMB2P55268 1798 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 GPR75-ASB3A0A0A6YYF3 556 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 LCA5LO95447 670 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 NCF2P19878 526 aaPredicted RBP9.2□□□□□ -0.94
COL6A5-202ENST00000312481 TRIM65Q6PJ69 517 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 METTL3Q86U44 580 aaKnown RBP9.2□□□□□ -0.94
COL6A5-202ENST00000312481 CHST13Q8NET6 341 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 THAP11Q96EK4 314 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 GCNAQ96QF7 691 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 COPG2Q9UBF2 871 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 MROH7Q68CQ1 1323 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 TGDSO95455 350 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 RAD51Q06609 339 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 PDIA2Q13087 525 aaKnown RBP9.2□□□□□ -0.94
COL6A5-202ENST00000312481 SULF1Q8IWU6 871 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 PNPT1Q8TCS8 783 aaKnown RBP9.2□□□□□ -0.94
COL6A5-202ENST00000312481 APOL4Q9BPW4 351 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 AP5M1Q9H0R1 490 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 ATAD3AQ9NVI7 634 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 NCKIPSDQ9NZQ3 722 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 SLC25A27O95847 323 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 PAEPP09466 180 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 PSMC1P62191 440 aaKnown RBP9.2□□□□□ -0.94
COL6A5-202ENST00000312481 ACAD10Q6JQN1 1059 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 TMEM126BQ8IUX1 230 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 SLC40A1Q9NP59 571 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 ADAM30Q9UKF2 790 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 SUFUQ9UMX1 484 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 CRYBG1Q9Y4K1 1723 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 TTC36A6NLP5 189 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 CD3EAPO15446 510 aaKnown RBP9.19□□□□□ -0.94
COL6A5-202ENST00000312481 YWHABP31946 246 aaKnown RBP9.19□□□□□ -0.94
COL6A5-202ENST00000312481 COILP38432 576 aaPredicted RBP9.19□□□□□ -0.94
COL6A5-202ENST00000312481 POLE2P56282 527 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 FBXO33Q7Z6M2 555 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 TEX13BQ9BXU2 312 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 DHX33Q9H6R0 707 aaKnown RBP9.19□□□□□ -0.94
COL6A5-202ENST00000312481 KIF17Q9P2E2 1029 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 TIAM2Q8IVF5 1701 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 RBAK-RBAKDNI3L0D1 243 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 IFNA14P01570 189 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 ALAS1P13196 640 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 NAMPTP43490 491 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 TMEM270Q6UE05 265 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 ULK2Q8IYT8 1036 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 NAF1Q96HR8 494 aaKnown RBP9.19□□□□□ -0.94
COL6A5-202ENST00000312481 PIH1D3Q9NQM4 214 aaKnown RBP9.19□□□□□ -0.94
COL6A5-202ENST00000312481 PIK3CDO00329 1044 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 MAP4P27816 1152 aaKnown RBP9.19□□□□□ -0.94
COL6A5-202ENST00000312481 MAGEA4P43358 317 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 SLC7A5Q01650 507 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 XRCC4Q13426 336 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 ZBED8Q8IZ13 594 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 ADGRF4Q8IZF3 695 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 COBLO75128 1261 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 RAP1GAPP47736 663 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 BMT2Q1RMZ1 405 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 RFX4Q33E94 735 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 IER5Q5VY09 327 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 DPH6Q7L8W6 267 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 TMC3Q7Z5M5 1100 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 KRT73Q86Y46 540 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 PMM2O15305 246 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 CYP19A1P11511 503 aaPredicted RBP9.19□□□□□ -0.94
COL6A5-202ENST00000312481 ACADVLP49748 655 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 GUCY1A3Q02108 690 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 TAB1Q15750 504 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 PPP4R4Q6NUP7 873 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 STAMQ92783 540 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 RBM12Q9NTZ6 932 aaKnown RBP9.19□□□□□ -0.94
COL6A5-202ENST00000312481 INO80B-WBP1J3KQ70 363 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 HNRNPH1P31943 449 aaKnown RBP9.19□□□□□ -0.94
COL6A5-202ENST00000312481 HADHBP55084 474 aaKnown RBP9.19□□□□□ -0.94
COL6A5-202ENST00000312481 INSCQ1MX18 579 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 ZCWPW2Q504Y3 356 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms