RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 PHBP35232 272 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 MAP3K7CLP57077 242 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 ARPC4P59998 168 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 RNASELQ05823 741 aaKnown RBP6.33□□□□□ -1.4
SEC22A-201ENST00000309934 GFPT1Q06210 699 aaPredicted RBP6.33□□□□□ -1.4
SEC22A-201ENST00000309934 SMARCB1Q12824 385 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 TARBP2Q15633 366 aaKnown RBP6.33□□□□□ -1.4
SEC22A-201ENST00000309934 SAPCD2Q86UD0 394 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 CBWD2Q8IUF1 395 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 FZD8Q9H461 694 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 GPRC5CQ9NQ84 441 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 SCAF8Q9UPN6 1271 aaKnown RBP6.33□□□□□ -1.4
SEC22A-201ENST00000309934 AGAP1Q9UPQ3 857 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 SSX2IPQ9Y2D8 614 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 DCDC2CA8MYV0 355 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 GOLGA8KD6RF30 607 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 SPECC1L-ADORA2AF8WAN1 911 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 CAPN9O14815 690 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 PRPSAP2O60256 369 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 PALMO75781 387 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 FOSL1P15407 271 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 ARL4AP40617 200 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 TUFMP49411 452 aaKnown RBP6.33□□□□□ -1.4
SEC22A-201ENST00000309934 HADHBP55084 474 aaKnown RBP6.33□□□□□ -1.4
SEC22A-201ENST00000309934 BASP1P80723 227 aaKnown RBP6.33□□□□□ -1.4
SEC22A-201ENST00000309934 CREMQ03060 361 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 ERCC6LQ2NKX8 1250 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 SLC44A4Q53GD3 710 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 FBXW10Q5XX13 1052 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 CCDC62Q6P9F0 684 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 CAPN12Q6ZSI9 719 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 IRF2BP1Q8IU81 584 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 CCDC105Q8IYK2 499 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 FAM71AQ8IYT1 594 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 MMGT1Q8N4V1 131 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 CCDC89Q8N998 374 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 OR6B3Q8NGW1 331 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 SHC3Q92529 594 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 C18orf8Q96DM3 657 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 VMP1Q96GC9 406 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 COLEC11Q9BWP8 271 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 HDAC6Q9UBN7 1215 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 DKK3Q9UBP4 350 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 ADAM21Q9UKJ8 722 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 SCN9AQ15858 1988 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 LRRIQ3A6PVS8 624 aaPredicted RBP6.32□□□□□ -1.4
SEC22A-201ENST00000309934 BUB1O43683 1085 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 RFC1P35251 1148 aaPredicted RBP6.32□□□□□ -1.4
SEC22A-201ENST00000309934 CCT5P48643 541 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 ACOT2P49753 483 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 GALCP54803 685 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 MAPK7Q13164 816 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 PTK7Q13308 1070 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 MESDQ14696 234 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 UGCGQ16739 394 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 FBXO38Q6PIJ6 1188 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 SPATA24Q86W54 205 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 TRIM50Q86XT4 487 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 LRRC71Q8N4P6 559 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 PXYLP1Q8TE99 480 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 NUP85Q9BW27 656 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 CELF4Q9BZC1 486 aaKnown RBP6.32□□□□□ -1.4
SEC22A-201ENST00000309934 NDEL1Q9GZM8 345 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 FAM204AQ9H8W3 233 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 AAASQ9NRG9 546 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 CREBZFQ9NS37 354 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 SEPT10Q9P0V9 454 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 BARX2Q9UMQ3 279 aaPredicted RBP6.32□□□□□ -1.4
SEC22A-201ENST00000309934 SSC5DA1L4H1 1573 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 A0A087WZ62 844 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 AP5Z1O43299 807 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 CNMDO75829 334 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 IMPDH2P12268 514 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 CYP11B1P15538 503 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 CASP4P49662 377 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 CLCN3P51790 818 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 NEK2P51955 445 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 PLCB3Q01970 1234 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 MPP3Q13368 585 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 ZNF268Q14587 947 aaPredicted RBP6.32□□□□□ -1.4
SEC22A-201ENST00000309934 INAQ16352 499 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 CLEC16AQ2KHT3 1053 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.32□□□□□ -1.4
SEC22A-201ENST00000309934 ANKRD7Q92527 254 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 BAP1Q92560 729 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 GFM2Q969S9 779 aaKnown RBP6.32□□□□□ -1.4
SEC22A-201ENST00000309934 GBP5Q96PP8 586 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 NR1H4Q96RI1 486 aaPredicted RBP6.32□□□□□ -1.4
SEC22A-201ENST00000309934 CDK5RAP1Q96SZ6 601 aaKnown RBP6.32□□□□□ -1.4
SEC22A-201ENST00000309934 DDX50Q9BQ39 737 aaKnown RBP6.32□□□□□ -1.4
SEC22A-201ENST00000309934 FDXACB1Q9BRP7 624 aaPredicted RBP6.32□□□□□ -1.4
SEC22A-201ENST00000309934 NSRP1Q9H0G5 558 aaKnown RBP6.32□□□□□ -1.4
SEC22A-201ENST00000309934 PLEKHA4Q9H4M7 779 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 TUBA8Q9NY65 449 aaPredicted RBP6.32□□□□□ -1.4
SEC22A-201ENST00000309934 CYP26A1O43174 497 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 DAPK3O43293 454 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 C22orf31O95567 290 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 NAT2P11245 290 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 SDC4P31431 198 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 GJA9P57773 515 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms