RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 SEPT8Q92599 483 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 C18orf8Q96DM3 657 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 MCEEQ96PE7 176 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 TMEM106CQ9BVX2 250 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 MIS12Q9H081 205 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 PHF24Q9UPV7 400 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 TRIP11Q15643 1979 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 A0A0U1RQF3 1178 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 PTGESO14684 152 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 MICAL2O94851 1124 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 MYBL1P10243 752 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 FGFR1P11362 822 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 MGAT3Q09327 533 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 SPOUT1Q5T280 376 aaKnown RBP11.79□□□□□ -0.52
TRIM59-201ENST00000309784 WSCD1Q658N2 575 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 METTL23Q86XA0 190 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.79□□□□□ -0.52
TRIM59-201ENST00000309784 SENP8Q96LD8 212 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 LPIN3Q9BQK8 851 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 SYT11Q9BT88 431 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 MIOSQ9NXC5 875 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 PAEPP09466 180 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 LILRA4P59901 499 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 C1QTNF8P60827 252 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 TLE2Q04725 743 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 CEP57Q86XR8 500 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 TNIP3Q96KP6 325 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 BCO2Q9BYV7 579 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 PARVAQ9NVD7 372 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 PCDHB7Q9Y5E2 793 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 GRAP2O75791 330 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 KCNE1P15382 129 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 CENPCQ03188 943 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 IFRD2Q12894 506 aaPredicted RBP11.78□□□□□ -0.52
TRIM59-201ENST00000309784 LONRF2Q1L5Z9 754 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 FAM102AQ5T9C2 384 aaPredicted RBP11.78□□□□□ -0.52
TRIM59-201ENST00000309784 MEI1Q5TIA1 1274 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 PPP1R2P3Q6NXS1 205 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 SLC24A5Q71RS6 500 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 CTU1Q7Z7A3 348 aaKnown RBP11.78□□□□□ -0.52
TRIM59-201ENST00000309784 AP1M1Q9BXS5 423 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 TRIM7Q9C029 511 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 TMEM39AQ9NV64 488 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.78□□□□□ -0.52
TRIM59-201ENST00000309784 HTTP42858 3142 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 UNGP13051 313 aaPredicted RBP11.78□□□□□ -0.52
TRIM59-201ENST00000309784 CCDC130P13994 396 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 CYP2C18P33260 490 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 BCAR1P56945 870 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 SOWAHAQ2M3V2 549 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 DPEP3Q9H4B8 488 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 L1RE1Q9UN81 338 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 SPTLC1O15269 473 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 DESP17661 470 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 LMO2P25791 158 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 BRCC3P46736 316 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 CDO1Q16878 200 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 TRIM60Q495X7 471 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 PPP1R26Q5T8A7 1209 aaPredicted RBP11.78□□□□□ -0.52
TRIM59-201ENST00000309784 DAB2IPQ5VWQ8 1189 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 ECHDC2Q86YB7 292 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 FAM149B1Q96BN6 582 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 PAAF1Q9BRP4 392 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 PLVAPQ9BX97 442 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 STRIP2Q9ULQ0 834 aa11.78□□□□□ -0.52
TRIM59-201ENST00000309784 NCANO14594 1321 aa11.77□□□□□ -0.52
TRIM59-201ENST00000309784 TADA3O75528 432 aa11.77□□□□□ -0.52
TRIM59-201ENST00000309784 CYP1A1P04798 512 aaPredicted RBP11.77□□□□□ -0.52
TRIM59-201ENST00000309784 AMPD2Q01433 879 aa11.77□□□□□ -0.52
TRIM59-201ENST00000309784 DDX43Q9NXZ2 648 aaKnown RBP11.77□□□□□ -0.52
TRIM59-201ENST00000309784 BTNL10A8MVZ5 291 aa11.77□□□□□ -0.53
TRIM59-201ENST00000309784 KRIT1O00522 736 aa11.77□□□□□ -0.53
TRIM59-201ENST00000309784 LSM8O95777 96 aaKnown RBP11.77□□□□□ -0.53
TRIM59-201ENST00000309784 FGGP02679 453 aa11.77□□□□□ -0.53
TRIM59-201ENST00000309784 KRT3P12035 628 aa11.77□□□□□ -0.53
TRIM59-201ENST00000309784 LCP1P13796 627 aa11.77□□□□□ -0.53
TRIM59-201ENST00000309784 CETN2P41208 172 aa11.77□□□□□ -0.53
TRIM59-201ENST00000309784 ARPP19P56211 112 aa11.77□□□□□ -0.53
TRIM59-201ENST00000309784 NKX3-2P78367 333 aa11.77□□□□□ -0.53
TRIM59-201ENST00000309784 RPAINQ86UA6 219 aa11.77□□□□□ -0.53
TRIM59-201ENST00000309784 NT5DC3Q86UY8 548 aa11.77□□□□□ -0.53
TRIM59-201ENST00000309784 ZBTB9Q96C00 473 aa11.77□□□□□ -0.53
TRIM59-201ENST00000309784 UBN1Q9NPG3 1134 aa11.77□□□□□ -0.53
TRIM59-201ENST00000309784 GOLGA6L10A0A0M3HER8 536 aa11.77□□□□□ -0.53
TRIM59-201ENST00000309784 ZMYND10O75800 440 aa11.77□□□□□ -0.53
TRIM59-201ENST00000309784 PSMA2P25787 234 aa11.77□□□□□ -0.53
TRIM59-201ENST00000309784 C8orf74Q6P047 294 aa11.77□□□□□ -0.53
TRIM59-201ENST00000309784 ALKAL1Q6UXT8 129 aa11.77□□□□□ -0.53
TRIM59-201ENST00000309784 EMC1Q8N766 993 aa11.77□□□□□ -0.53
TRIM59-201ENST00000309784 NOA1Q8NC60 698 aaKnown RBP11.77□□□□□ -0.53
TRIM59-201ENST00000309784 SLC2A14Q8TDB8 520 aa11.77□□□□□ -0.53
TRIM59-201ENST00000309784 DIS3LQ8TF46 1054 aaKnown RBP11.77□□□□□ -0.53
TRIM59-201ENST00000309784 PGRMC1O00264 195 aaKnown RBP11.76□□□□□ -0.53
TRIM59-201ENST00000309784 PIRO00625 290 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 ZNF132P52740 706 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 C1QBPQ07021 282 aaKnown RBP11.76□□□□□ -0.53
TRIM59-201ENST00000309784 ZBTB6Q15916 424 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 SCYL2Q6P3W7 929 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 FEZF2Q8TBJ5 459 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 PAWRQ96IZ0 340 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms