RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 CCDC125Q86Z20 511 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 SNRNP27Q8WVK2 155 aaKnown RBP13.32□□□□□ -0.28
RETREG3-201ENST00000309428 TEX13BQ9BXU2 312 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 KIAA1683Q9H0B3 1180 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 ACAD9Q9H845 621 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 B2RBV5 119 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 H7C0C1 242 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 ETS2P15036 469 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 TNFRSF8P28908 595 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 ATP5OP48047 213 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 SEMA3FQ13275 785 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 STXBP2Q15833 593 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 SMC1BQ8NDV3 1235 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 CRYGNQ8WXF5 182 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 CLMNQ96JQ2 1002 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 IWS1Q96ST2 819 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 TJP2Q9UDY2 1190 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 NEU2Q9Y3R4 380 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 HEY1Q9Y5J3 304 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 STK24Q9Y6E0 443 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 MYH4Q9Y623 1939 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 LOC100653049A0A140TA62 436 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 F8VP50 259 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 DDX3YO15523 660 aaKnown RBP13.31□□□□□ -0.28
RETREG3-201ENST00000309428 B4GALT5O43286 388 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 KRT34O76011 436 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 PRKCIP41743 596 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 PSEN1P49768 467 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 STAT5BP51692 787 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 JAK3P52333 1124 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 ZNF568Q3ZCX4 644 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 TREML2Q5T2D2 321 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 RNF220Q5VTB9 566 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 FAM228AQ86W67 206 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 TMEM121Q9BTD3 319 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 RXFP1Q9HBX9 757 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 NGRNQ9NPE2 291 aaKnown RBP13.31□□□□□ -0.28
RETREG3-201ENST00000309428 C2CD2Q9Y426 696 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.31□□□□□ -0.28
RETREG3-201ENST00000309428 PIK3CDO00329 1044 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 SNUPNO95149 360 aaKnown RBP13.31□□□□□ -0.28
RETREG3-201ENST00000309428 CHRNB2P17787 502 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 PHBP35232 272 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 TCF7P36402 384 aaPredicted RBP13.31□□□□□ -0.28
RETREG3-201ENST00000309428 CYP24A1Q07973 514 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 IFRD2Q12894 506 aaPredicted RBP13.31□□□□□ -0.28
RETREG3-201ENST00000309428 COBLL1Q53SF7 1204 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 RABGAP1LQ5R372 815 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 PCNX4Q63HM2 1172 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 ZDHHC14Q8IZN3 488 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 RNF217Q8TC41 542 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 HES6Q96HZ4 224 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 GPR88Q9GZN0 384 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 MIS12Q9H081 205 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 WNT8AQ9H1J5 351 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 POLIQ9UNA4 740 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 KIAA1551Q9HCM1 1747 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 CST3P01034 146 aaPredicted RBP13.31□□□□□ -0.28
RETREG3-201ENST00000309428 GSTA1P08263 222 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 MARSP56192 900 aaKnown RBP13.31□□□□□ -0.28
RETREG3-201ENST00000309428 TAS2R40P59535 323 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 MAP7Q14244 749 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 OLFML2BQ68BL8 750 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 CENPUQ71F23 418 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 TRMT10CQ7L0Y3 403 aaKnown RBP13.31□□□□□ -0.28
RETREG3-201ENST00000309428 MBOAT7Q96N66 472 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 TMEM8AQ9HCN3 771 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 GPATCH2LQ9NWQ4 482 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 TTLL3Q9Y4R7 772 aa13.31□□□□□ -0.28
RETREG3-201ENST00000309428 DNAJC6O75061 913 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 ATP4AP20648 1035 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 SNX30Q5VWJ9 437 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 RNF169Q8NCN4 708 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 DDX27Q96GQ7 796 aaKnown RBP13.3□□□□□ -0.28
RETREG3-201ENST00000309428 CPB2Q96IY4 423 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 ANLNQ9NQW6 1124 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 FAM49BQ9NUQ9 324 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 PTPRJQ12913 1337 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 DPPA5A6NC42 116 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 PTGER2P43116 358 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 PKN2Q16513 984 aaKnown RBP13.3□□□□□ -0.28
RETREG3-201ENST00000309428 TDRD10Q5VZ19 366 aaKnown RBP13.3□□□□□ -0.28
RETREG3-201ENST00000309428 DUPD1Q68J44 220 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 NXNQ6DKJ4 435 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 GPAT2Q6NUI2 795 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 AGGF1Q8N302 714 aaeCLIP13.3□□□□□ -0.28
RETREG3-201ENST00000309428 C3orf20Q8ND61 904 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 ATL2Q8NHH9 583 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.3□□□□□ -0.288e-8■■■■■ 28.2
RETREG3-201ENST00000309428 PGM2Q96G03 612 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 HERPUD2Q9BSE4 406 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 TBC1D10AQ9BXI6 508 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 AS3MTQ9HBK9 375 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 DIS3Q9Y2L1 958 aaKnown RBP13.3□□□□□ -0.28
RETREG3-201ENST00000309428 AHDC1Q5TGY3 1603 aaPredicted RBP13.3□□□□□ -0.28
RETREG3-201ENST00000309428 CCDC78A2IDD5 438 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 MGRN1O60291 552 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 C6orf89Q6UWU4 347 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 RFX6Q8HWS3 928 aa13.3□□□□□ -0.28
RETREG3-201ENST00000309428 TRAIPQ9BWF2 469 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms