RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 MYBL1P10243 752 aa23.21■■□□□ 1.31
TPM4-201ENST00000300933 EZRP15311 586 aaKnown RBP23.21■■□□□ 1.31
TPM4-201ENST00000300933 LAMC2Q13753 1193 aa23.21■■□□□ 1.31
TPM4-201ENST00000300933 GKAP1Q5VSY0 366 aaPredicted RBP23.21■■□□□ 1.31
TPM4-201ENST00000300933 EIF1ADQ8N9N8 165 aaKnown RBP23.21■■□□□ 1.31
TPM4-201ENST00000300933 ANKRD36BP1Q96IX9 119 aa23.21■■□□□ 1.31
TPM4-201ENST00000300933 C16orf70Q9BSU1 422 aa23.21■■□□□ 1.31
TPM4-201ENST00000300933 SEMA4AQ9H3S1 761 aa23.21■■□□□ 1.31
TPM4-201ENST00000300933 SMYD3Q9H7B4 428 aa23.21■■□□□ 1.31
TPM4-201ENST00000300933 H3BRB1 525 aa23.2■■□□□ 1.3
TPM4-201ENST00000300933 ARF4P18085 180 aaPredicted RBP23.2■■□□□ 1.3
TPM4-201ENST00000300933 MMP8P22894 467 aa23.2■■□□□ 1.3
TPM4-201ENST00000300933 PSMC4P43686 418 aa23.2■■□□□ 1.3
TPM4-201ENST00000300933 SLC26A2P50443 739 aa23.2■■□□□ 1.3
TPM4-201ENST00000300933 OGDHQ02218 1023 aa23.2■■□□□ 1.3
TPM4-201ENST00000300933 PLEKHA7Q6IQ23 1121 aa23.2■■□□□ 1.3
TPM4-201ENST00000300933 DENND1BQ6P3S1 775 aa23.2■■□□□ 1.3
TPM4-201ENST00000300933 PHF13Q86YI8 300 aaPredicted RBP23.2■■□□□ 1.3
TPM4-201ENST00000300933 LENG1Q96BZ8 264 aaPredicted RBP23.2■■□□□ 1.3
TPM4-201ENST00000300933 PWWP2AQ96N64 755 aa23.2■■□□□ 1.3
TPM4-201ENST00000300933 SDCBP2Q9H190 292 aa23.2■■□□□ 1.3
TPM4-201ENST00000300933 TUT1Q9H6E5 874 aaKnown RBP23.2■■□□□ 1.3
TPM4-201ENST00000300933 SRRM3A6NNA2 597 aaPredicted RBP23.2■■□□□ 1.3
TPM4-201ENST00000300933 FSCN2O14926 492 aa23.2■■□□□ 1.3
TPM4-201ENST00000300933 FEZF2Q8TBJ5 459 aa23.2■■□□□ 1.3
TPM4-201ENST00000300933 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.2■■□□□ 1.31e-6■■■■■ 56.2
TPM4-201ENST00000300933 TRIM11Q96F44 468 aa23.2■■□□□ 1.3
TPM4-201ENST00000300933 TWNKQ96RR1 684 aa23.2■■□□□ 1.3
TPM4-201ENST00000300933 TLDC2A0PJX2 215 aa23.19■■□□□ 1.3
TPM4-201ENST00000300933 PIK3R2O00459 728 aa23.19■■□□□ 1.3
TPM4-201ENST00000300933 SMPD1P17405 629 aa23.19■■□□□ 1.3
TPM4-201ENST00000300933 CCNA1P78396 465 aa23.19■■□□□ 1.3
TPM4-201ENST00000300933 LACTBP83111 547 aaPredicted RBP23.19■■□□□ 1.3
TPM4-201ENST00000300933 KRT17Q04695 432 aa23.19■■□□□ 1.3
TPM4-201ENST00000300933 ZNF252P-AS1Q0IIN9 211 aa23.19■■□□□ 1.3
TPM4-201ENST00000300933 PPP2R5EQ16537 467 aa23.19■■□□□ 1.3
TPM4-201ENST00000300933 PTPN18Q99952 460 aa23.19■■□□□ 1.3
TPM4-201ENST00000300933 EPB41L4BQ9H329 900 aa23.19■■□□□ 1.3
TPM4-201ENST00000300933 CYTH4Q9UIA0 394 aa23.19■■□□□ 1.3
TPM4-201ENST00000300933 TNFSF13BQ9Y275 285 aa23.19■■□□□ 1.3
TPM4-201ENST00000300933 HSPA6P17066 643 aa23.19■■□□□ 1.3
TPM4-201ENST00000300933 IFFO1Q0D2I5 559 aa23.19■■□□□ 1.3
TPM4-201ENST00000300933 AMHR2Q16671 573 aa23.19■■□□□ 1.3
TPM4-201ENST00000300933 KIZQ2M2Z5 673 aa23.19■■□□□ 1.3
TPM4-201ENST00000300933 SHCBP1Q8NEM2 672 aa23.19■■□□□ 1.3
TPM4-201ENST00000300933 FAM49AQ9H0Q0 323 aaPredicted RBP23.19■■□□□ 1.3
TPM4-201ENST00000300933 PDZD7Q9H5P4 517 aa23.19■■□□□ 1.3
TPM4-201ENST00000300933 MRPL47Q9HD33 250 aaKnown RBP23.19■■□□□ 1.3
TPM4-201ENST00000300933 SETD4Q9NVD3 440 aa23.19■■□□□ 1.3
TPM4-201ENST00000300933 PAX7P23759 505 aa23.18■■□□□ 1.3
TPM4-201ENST00000300933 CLNS1AP54105 237 aaKnown RBP23.18■■□□□ 1.3
TPM4-201ENST00000300933 DCUN1D2Q6PH85 259 aa23.18■■□□□ 1.3
TPM4-201ENST00000300933 TRIM72Q6ZMU5 477 aa23.18■■□□□ 1.3
TPM4-201ENST00000300933 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.18■■□□□ 1.33e-7■□□□□ 8.7
TPM4-201ENST00000300933 GPR142Q7Z601 462 aa23.18■■□□□ 1.3
TPM4-201ENST00000300933 KIAA0319LQ8IZA0 1049 aa23.18■■□□□ 1.3
TPM4-201ENST00000300933 PARVAQ9NVD7 372 aa23.18■■□□□ 1.3
TPM4-201ENST00000300933 ASIC3Q9UHC3 531 aa23.18■■□□□ 1.3
TPM4-201ENST00000300933 BAIAP2L1Q9UHR4 511 aa23.18■■□□□ 1.3
TPM4-201ENST00000300933 DOCK3Q8IZD9 2030 aa23.18■■□□□ 1.3
TPM4-201ENST00000300933 ECEL1O95672 775 aa23.18■■□□□ 1.3
TPM4-201ENST00000300933 CETPP11597 493 aa23.18■■□□□ 1.3
TPM4-201ENST00000300933 PHKA2P46019 1235 aa23.18■■□□□ 1.3
TPM4-201ENST00000300933 PMS2P54278 862 aa23.18■■□□□ 1.3
TPM4-201ENST00000300933 SLC29A2Q14542 456 aa23.18■■□□□ 1.3
TPM4-201ENST00000300933 CYP1B1Q16678 543 aa23.18■■□□□ 1.3
TPM4-201ENST00000300933 KATNBL1Q9H079 304 aa23.18■■□□□ 1.3
TPM4-201ENST00000300933 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.18■■□□□ 1.3
TPM4-201ENST00000300933 B4GALT4O60513 344 aa23.17■■□□□ 1.3
TPM4-201ENST00000300933 PPFIA2O75334 1257 aa23.17■■□□□ 1.3
TPM4-201ENST00000300933 AP3M2P53677 418 aa23.17■■□□□ 1.3
TPM4-201ENST00000300933 SLC10A6Q3KNW5 377 aa23.17■■□□□ 1.3
TPM4-201ENST00000300933 HIBCHQ6NVY1 386 aaPredicted RBP23.17■■□□□ 1.3
TPM4-201ENST00000300933 EXOC8Q8IYI6 725 aa23.17■■□□□ 1.3
TPM4-201ENST00000300933 PPTC7Q8NI37 304 aa23.17■■□□□ 1.3
TPM4-201ENST00000300933 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.17■■□□□ 1.3
TPM4-201ENST00000300933 HAUS1Q96CS2 278 aa23.17■■□□□ 1.3
TPM4-201ENST00000300933 SLC1A1P43005 524 aa23.17■■□□□ 1.3
TPM4-201ENST00000300933 C1QBPQ07021 282 aaKnown RBP23.17■■□□□ 1.3
TPM4-201ENST00000300933 CLUL1Q15846 466 aa23.17■■□□□ 1.3
TPM4-201ENST00000300933 MTHFD1LQ6UB35 978 aa23.17■■□□□ 1.3
TPM4-201ENST00000300933 RHOT1Q8IXI2 618 aa23.17■■□□□ 1.3
TPM4-201ENST00000300933 CCT6BQ92526 530 aa23.17■■□□□ 1.3
TPM4-201ENST00000300933 TXLNGYQ9BZA5 131 aa23.17■■□□□ 1.3
TPM4-201ENST00000300933 LRRC19Q9H756 370 aa23.17■■□□□ 1.3
TPM4-201ENST00000300933 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.17■■□□□ 1.37e-12■■■■■ 49
TPM4-201ENST00000300933 PPME1Q9Y570 386 aa23.17■■□□□ 1.3
TPM4-201ENST00000300933 PODXLO00592 558 aa23.16■■□□□ 1.3
TPM4-201ENST00000300933 ATF7P17544 494 aaPredicted RBP23.16■■□□□ 1.3
TPM4-201ENST00000300933 ZNF667Q5HYK9 610 aa23.16■■□□□ 1.3
TPM4-201ENST00000300933 ZNF484Q5JVG2 852 aa23.16■■□□□ 1.3
TPM4-201ENST00000300933 FAM182AQ5T1J6 154 aa23.16■■□□□ 1.3
TPM4-201ENST00000300933 DNAJC24Q6P3W2 148 aa23.16■■□□□ 1.3
TPM4-201ENST00000300933 ERICH1Q86X53 443 aa23.16■■□□□ 1.3
TPM4-201ENST00000300933 NPLOC4Q8TAT6 608 aa23.16■■□□□ 1.3
TPM4-201ENST00000300933 PRMT7Q9NVM4 692 aaPredicted RBP23.16■■□□□ 1.3
TPM4-201ENST00000300933 SLCO1A2P46721 670 aa23.16■■□□□ 1.3
TPM4-201ENST00000300933 ACCSLQ4AC99 568 aa23.16■■□□□ 1.3
TPM4-201ENST00000300933 MARCH8Q5T0T0 291 aa23.16■■□□□ 1.3
TPM4-201ENST00000300933 EMC1Q8N766 993 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms