RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 ETFBP38117 255 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 SOX10P56693 466 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 DRP2Q13474 957 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 ZNF268Q14587 947 aaPredicted RBP8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 PDK2Q15119 407 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 ACBD5Q5T8D3 534 aaPredicted RBP8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 JADE1Q6IE81 842 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 SLC51AQ86UW1 340 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 ZNF557Q8N988 423 aaPredicted RBP8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 SMARCD1Q96GM5 515 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 CHP1Q99653 195 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 FAM49BQ9NUQ9 324 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 TRPM5Q9NZQ8 1165 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 SF3B1O75533 1304 aaKnown RBP eCLIP8.74□□□□□ -1.012e-9■■■■■ 80.4
SNRPD1-201ENST00000300413 BRD2P25440 801 aaKnown RBP8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 SLC11A2P49281 568 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 CENPCQ03188 943 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 NME3Q13232 169 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 PPIGQ13427 754 aaKnown RBP eCLIP8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 ARID5BQ14865 1188 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 KCNA10Q16322 511 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 NOMO2Q5JPE7 1267 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 CTU1Q7Z7A3 348 aaKnown RBP8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 VPS52Q8N1B4 723 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 PXYLP1Q8TE99 480 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 CPA5Q8WXQ8 436 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 FMO2Q99518 471 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 CARD9Q9H257 536 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 KCTD10Q9H3F6 313 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 EPB41L5Q9HCM4 733 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 AVENQ9NQS1 362 aaPredicted RBP8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 SH3BP1Q9Y3L3 701 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 MYH7P12883 1935 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 A0A0B4J269 797 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 FRMD3A2A2Y4 597 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 ANKRD63C9JTQ0 380 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 TRIM66O15016 1216 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 COPS2P61201 443 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 ARHGAP1Q07960 439 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 THOC5Q13769 683 aaKnown RBP8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 SETDB1Q15047 1291 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 PTPROQ16827 1216 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 P3H1Q32P28 736 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 CPLX4Q7Z7G2 160 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 PLCD3Q8N3E9 789 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 TBCBQ99426 244 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 MAGED2Q9UNF1 606 aaPredicted RBP8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 ST3GAL5Q9UNP4 418 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 CRCPO75575 148 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 ELNP15502 786 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 PRKCIP41743 596 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 JAG1P78504 1218 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 PDK1Q15118 436 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 ALS2CLQ60I27 953 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 DCLRE1AQ6PJP8 1040 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 DEFB128Q7Z7B8 93 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 PHLDB2Q86SQ0 1253 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 ATL2Q8NHH9 583 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 EMID1Q96A84 441 aaPredicted RBP8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 MCEEQ96PE7 176 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 NFKBIZQ9BYH8 718 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 ENTPD7Q9NQZ7 604 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 PCSK1NQ9UHG2 260 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 PTPN22Q9Y2R2 807 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 COL24A1Q17RW2 1714 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 MYH1P12882 1939 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 SHANK3Q9BYB0 1731 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 TMEM150BA6NC51 233 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 CREB3O43889 395 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 ERBB2P04626 1255 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 COL6A1P12109 1028 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 OXCT1P55809 520 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 ZBTB16Q05516 673 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 COL9A3Q14050 684 aaPredicted RBP8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 CLEC16AQ2KHT3 1053 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 ARSHQ5FYA8 562 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 GJC2Q5T442 439 aaPredicted RBP8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 LRRC43Q8N309 656 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 TOP6BLQ8N6T0 577 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 ATRIPQ8WXE1 791 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 LENG9Q96B70 501 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 FAF2Q96CS3 445 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 RNPC3Q96LT9 517 aaKnown RBP8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 SGIP1Q9BQI5 828 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 CNPY3Q9BT09 278 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 TSPYL2Q9H2G4 693 aaPredicted RBP8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 DMAP1Q9NPF5 467 aaPredicted RBP8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 RRAGDQ9NQL2 400 aaPredicted RBP8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 DDX43Q9NXZ2 648 aaKnown RBP8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 ABI2Q9NYB9 513 aaPredicted RBP8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 CDH9Q9ULB4 789 aa8.73□□□□□ -1.01
SNRPD1-201ENST00000300413 TARSL2A2RTX5 802 aaKnown RBP8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 ZBTB39O15060 712 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 RGS7P49802 495 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 CCDC15Q0P6D6 951 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 NR1H3Q13133 447 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 ZACNQ401N2 412 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 SLC24A5Q71RS6 500 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 C18orf25Q96B23 403 aaPredicted RBP8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 HIPK3Q9H422 1215 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms