RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 DGKIO75912 1065 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 PAX7P23759 505 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 HMOX2P30519 316 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 PDAP1Q13442 181 aaKnown RBP11.5□□□□□ -0.57
PBRM1-201ENST00000296302 CCNJLQ8IV13 435 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 MICU2Q8IYU8 434 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 ELMO2Q96JJ3 720 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 TMEM120AQ9BXJ8 343 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 SEMA6BQ9H3T3 888 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 PLEKHA5Q9HAU0 1116 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 AGPAT3Q9NRZ7 376 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 TULP4Q9NRJ4 1543 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 PSMA4P25789 261 aaKnown RBP11.5□□□□□ -0.57
PBRM1-201ENST00000296302 CCDC15Q0P6D6 951 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 KRR1Q13601 381 aaKnown RBP11.5□□□□□ -0.57
PBRM1-201ENST00000296302 SNX30Q5VWJ9 437 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 BNC2Q6ZN30 1099 aaPredicted RBP11.5□□□□□ -0.57
PBRM1-201ENST00000296302 C16orf86Q6ZW13 317 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 FBXL16Q8N461 479 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 CATSPER2Q96P56 530 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 FAM192AQ9GZU8 254 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 TDRD3Q9H7E2 651 aaKnown RBP11.5□□□□□ -0.57
PBRM1-201ENST00000296302 NYAP2Q9P242 653 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 RIPK2O43353 540 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 PRKCBP05771 671 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 CYP11B2P19099 503 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 ACOT2P49753 483 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 EP400NLQ6ZTU2 488 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 TMPRSS6Q8IU80 811 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 TNIP2Q8NFZ5 429 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 ZKSCAN4Q969J2 545 aaPredicted RBP11.5□□□□□ -0.57
PBRM1-201ENST00000296302 OPTNQ96CV9 577 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 RIT2Q99578 217 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 CASS4Q9NQ75 786 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 FOXN3O00409 490 aaPredicted RBP11.49□□□□□ -0.57
PBRM1-201ENST00000296302 KCNK10P57789 538 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 C11orf63Q6NUN7 778 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 MTMR8Q96EF0 704 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 MASTLQ96GX5 879 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 FAR2Q96K12 515 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 SEMA4AQ9H3S1 761 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 JPH1Q9HDC5 661 aaPredicted RBP11.49□□□□□ -0.57
PBRM1-201ENST00000296302 MTSS1O43312 755 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 USP1O94782 785 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 LCP1P13796 627 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 RASA1P20936 1047 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 SULT1E1P49888 294 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 CCNG2Q16589 344 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 ARHGAP22Q7Z5H3 698 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 STX19Q8N4C7 294 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 FBXO36Q8NEA4 188 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 STK32AQ8WU08 396 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 INPP5DQ92835 1189 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 KIF12Q96FN5 646 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 FAM153AQ9UHL3 310 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 VCAM1P19320 739 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 GPD1P21695 349 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 RBP5P82980 135 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 CRELD2Q6UXH1 353 aaPredicted RBP11.49□□□□□ -0.57
PBRM1-201ENST00000296302 ZNF571Q7Z3V5 609 aaPredicted RBP11.49□□□□□ -0.57
PBRM1-201ENST00000296302 TAGAPQ8N103 731 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 PDCD6IPQ8WUM4 868 aaKnown RBP11.49□□□□□ -0.57
PBRM1-201ENST00000296302 ATG4AQ8WYN0 398 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 NMD3Q96D46 503 aaKnown RBP11.49□□□□□ -0.57
PBRM1-201ENST00000296302 TRAPPC9Q96Q05 1148 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 MED15Q96RN5 788 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 PAFAH2Q99487 392 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 TLR10Q9BXR5 811 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 KANSL1LA0AUZ9 987 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 DFFAO00273 331 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 TLR2O60603 784 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 SERPINI2O75830 405 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 GRK2P25098 689 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 TNFRSF8P28908 595 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 ERVK-9P63128 1117 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 ELF3P78545 371 aaPredicted RBP11.49□□□□□ -0.57
PBRM1-201ENST00000296302 MCL1Q07820 350 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 BOLA3Q53S33 107 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 KIAA1841Q6NSI8 718 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 CD302Q8IX05 232 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 SEPT8Q92599 483 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 ARHGEF1Q92888 912 aaKnown RBP11.49□□□□□ -0.57
PBRM1-201ENST00000296302 CENPTQ96BT3 561 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 BTBD10Q9BSF8 475 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.49□□□□□ -0.57
PBRM1-201ENST00000296302 NAALADL1Q9UQQ1 740 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 FLT1P17948 1338 aa11.49□□□□□ -0.57
PBRM1-201ENST00000296302 SKAP2O75563 359 aaPredicted RBP11.48□□□□□ -0.57
PBRM1-201ENST00000296302 DDX5P17844 614 aaKnown RBP11.48□□□□□ -0.57
PBRM1-201ENST00000296302 CNTFP26441 200 aa11.48□□□□□ -0.57
PBRM1-201ENST00000296302 FDFT1P37268 417 aa11.48□□□□□ -0.57
PBRM1-201ENST00000296302 AQP5P55064 265 aa11.48□□□□□ -0.57
PBRM1-201ENST00000296302 GPAT2Q6NUI2 795 aa11.48□□□□□ -0.57
PBRM1-201ENST00000296302 HORMAD1Q86X24 394 aa11.48□□□□□ -0.57
PBRM1-201ENST00000296302 SCFD2Q8WU76 684 aa11.48□□□□□ -0.57
PBRM1-201ENST00000296302 NIF3L1Q9GZT8 377 aa11.48□□□□□ -0.57
PBRM1-201ENST00000296302 SIK2Q9H0K1 926 aa11.48□□□□□ -0.57
PBRM1-201ENST00000296302 RIC8BQ9NVN3 520 aa11.48□□□□□ -0.57
PBRM1-201ENST00000296302 ZNF197O14709 1029 aa11.48□□□□□ -0.57
PBRM1-201ENST00000296302 ZSCAN9O15535 394 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms