RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 MTBPQ96DY7 904 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 HIC2Q96JB3 615 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 KIFC3Q9BVG8 833 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 EBF3Q9H4W6 596 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 GPRC5CQ9NQ84 441 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 CHCHD3Q9NX63 227 aaKnown RBP10.79□□□□□ -0.68
LMX1A-201ENST00000294816 SLC24A2Q9UI40 661 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 C10orf71Q711Q0 1435 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 SPECC1L-ADORA2AF8WAN1 911 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 TLR3O15455 904 aaKnown RBP10.79□□□□□ -0.68
LMX1A-201ENST00000294816 LIASO43766 372 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 PFDN1O60925 122 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 SPATA31D3P0C874 917 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 ARP10275 920 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 GLRA2P23416 452 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 NFIAQ12857 509 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 KLF1Q13351 362 aaPredicted RBP10.79□□□□□ -0.68
LMX1A-201ENST00000294816 SNRNP35Q16560 246 aaKnown RBP10.79□□□□□ -0.68
LMX1A-201ENST00000294816 GSTA3Q16772 222 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 SPATA31D4Q6ZUB0 917 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 HAUS6Q7Z4H7 955 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 TRIM74Q86UV6 250 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 TRIM73Q86UV7 250 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 ZFPM1Q8IX07 1006 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 RBM15BQ8NDT2 890 aaKnown RBP10.79□□□□□ -0.68
LMX1A-201ENST00000294816 PLIN4Q96Q06 1357 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 NR1H4Q96RI1 486 aaPredicted RBP10.79□□□□□ -0.68
LMX1A-201ENST00000294816 FOXP3Q9BZS1 431 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 PREBQ9HCU5 417 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 ETNK2Q9NVF9 386 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.79□□□□□ -0.68
LMX1A-201ENST00000294816 PPM1HQ9ULR3 514 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 RNASEH1O60930 286 aaKnown RBP10.79□□□□□ -0.68
LMX1A-201ENST00000294816 CYP3A4P08684 503 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 RARBP10826 455 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 GYS1P13807 737 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 EPHB1P54762 984 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 CDC16Q13042 620 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 OLFML2BQ68BL8 750 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 MFSD7Q6UXD7 560 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 MARK2Q7KZI7 788 aaKnown RBP10.79□□□□□ -0.68
LMX1A-201ENST00000294816 NLRX1Q86UT6 975 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 FBXL13Q8NEE6 735 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.79□□□□□ -0.68
LMX1A-201ENST00000294816 HELQQ8TDG4 1101 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 PYDC1Q8WXC3 89 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 POMGNT1Q8WZA1 660 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 FAM210AQ96ND0 272 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 GALNT8Q9NY28 637 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 CLIC5Q9NZA1 410 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 SAE1Q9UBE0 346 aaPredicted RBP10.79□□□□□ -0.68
LMX1A-201ENST00000294816 NARFQ9UHQ1 456 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 A8MXQ7 604 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 I3L4J1 428 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 STK10O94804 968 aaKnown RBP10.78□□□□□ -0.68
LMX1A-201ENST00000294816 TCF4P15884 667 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 GPX6P59796 221 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 ZC3H12AQ5D1E8 599 aaKnown RBP10.78□□□□□ -0.68
LMX1A-201ENST00000294816 RAPH1Q70E73 1250 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 PRPF39Q86UA1 669 aaKnown RBP10.78□□□□□ -0.68
LMX1A-201ENST00000294816 ARID3BQ8IVW6 561 aaPredicted RBP10.78□□□□□ -0.68
LMX1A-201ENST00000294816 CTAGE3PQ8IX95 158 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 ATP11CQ8NB49 1132 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 DCAF4Q8WV16 495 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 SKA1Q96BD8 255 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 CCDC124Q96CT7 223 aaKnown RBP10.78□□□□□ -0.68
LMX1A-201ENST00000294816 CHMP2BQ9UQN3 213 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 ATRNL1Q5VV63 1379 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 ALOX15BO15296 676 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 HNRNPRO43390 633 aaKnown RBP10.78□□□□□ -0.68
LMX1A-201ENST00000294816 PSMD10O75832 226 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 ADSSP30520 456 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 CIITAP33076 1130 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 CDK7P50613 346 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 TMPRSS15P98073 1019 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 MAP7Q14244 749 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 FAM102BQ5T8I3 360 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 MIER3Q7Z3K6 550 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 SESTD1Q86VW0 696 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 SPATA24Q86W54 205 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 RELL1Q8IUW5 271 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 FBXO36Q8NEA4 188 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 SLC26A7Q8TE54 656 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 DDX1Q92499 740 aaKnown RBP10.78□□□□□ -0.68
LMX1A-201ENST00000294816 MPP4Q96JB8 637 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 OLFM3Q96PB7 478 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 PANX3Q96QZ0 392 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 MECRQ9BV79 373 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 TEKT3Q9BXF9 490 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 C1orf112Q9NSG2 853 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 ATXN10Q9UBB4 475 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 RABGEF1Q9UJ41 708 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 SH3BP1Q9Y3L3 701 aa10.78□□□□□ -0.68
LMX1A-201ENST00000294816 GAKO14976 1311 aa10.77□□□□□ -0.68
LMX1A-201ENST00000294816 IGLV3-22A0A075B6J6 115 aa10.77□□□□□ -0.68
LMX1A-201ENST00000294816 G3V3G9 751 aa10.77□□□□□ -0.68
LMX1A-201ENST00000294816 PGM3O95394 542 aa10.77□□□□□ -0.68
LMX1A-201ENST00000294816 HARSP12081 509 aaKnown RBP10.77□□□□□ -0.68
LMX1A-201ENST00000294816 YWHAGP61981 247 aaKnown RBP eCLIP10.77□□□□□ -0.68
LMX1A-201ENST00000294816 USP46P62068 366 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms