RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 THEM5Q8N1Q8 247 aa27.19■■□□□ 1.94
U2AF1-201ENST00000291552 PDCL2Q8N4E4 241 aa27.19■■□□□ 1.94
U2AF1-201ENST00000291552 NELL2Q99435 816 aa27.19■■□□□ 1.94
U2AF1-201ENST00000291552 FBXO4Q9UKT5 387 aa27.19■■□□□ 1.94
U2AF1-201ENST00000291552 NDRG2Q9UN36 371 aaKnown RBP27.19■■□□□ 1.94
U2AF1-201ENST00000291552 PIAS3Q9Y6X2 628 aa27.19■■□□□ 1.94
U2AF1-201ENST00000291552 GREB1Q4ZG55 1949 aa27.19■■□□□ 1.94
U2AF1-201ENST00000291552 CEP250Q9BV73 2442 aa27.18■■□□□ 1.94
U2AF1-201ENST00000291552 PTPRDP23468 1912 aa27.18■■□□□ 1.94
U2AF1-201ENST00000291552 LAMTOR5O43504 91 aa27.18■■□□□ 1.94
U2AF1-201ENST00000291552 PRAMEF12O95522 483 aa27.18■■□□□ 1.94
U2AF1-201ENST00000291552 YEATS4O95619 227 aa27.18■■□□□ 1.94
U2AF1-201ENST00000291552 LDHAP00338 332 aaKnown RBP27.18■■□□□ 1.94
U2AF1-201ENST00000291552 HAPLN1P10915 354 aaPredicted RBP27.18■■□□□ 1.94
U2AF1-201ENST00000291552 PNPLA4P41247 253 aa27.18■■□□□ 1.94
U2AF1-201ENST00000291552 TUFMP49411 452 aaKnown RBP27.18■■□□□ 1.94
U2AF1-201ENST00000291552 FCHO2Q0JRZ9 810 aa27.18■■□□□ 1.94
U2AF1-201ENST00000291552 ZNF528Q3MIS6 628 aa27.18■■□□□ 1.94
U2AF1-201ENST00000291552 SPPL2BQ8TCT7 592 aa27.18■■□□□ 1.94
U2AF1-201ENST00000291552 DHX58Q96C10 678 aa27.18■■□□□ 1.94
U2AF1-201ENST00000291552 ZNF396Q96N95 335 aaPredicted RBP27.18■■□□□ 1.94
U2AF1-201ENST00000291552 MTMR12Q9C0I1 747 aa27.18■■□□□ 1.94
U2AF1-201ENST00000291552 ATXN3LQ9H3M9 355 aa27.18■■□□□ 1.94
U2AF1-201ENST00000291552 TMEM206Q9H813 350 aa27.18■■□□□ 1.94
U2AF1-201ENST00000291552 ABI2Q9NYB9 513 aaPredicted RBP27.18■■□□□ 1.94
U2AF1-201ENST00000291552 MRPS17Q9Y2R5 130 aaKnown RBP27.18■■□□□ 1.94
U2AF1-201ENST00000291552 ANAPC1Q9H1A4 1944 aa27.18■■□□□ 1.94
U2AF1-201ENST00000291552 ZNF263O14978 683 aa27.17■■□□□ 1.94
U2AF1-201ENST00000291552 CCDC142Q17RM4 750 aa27.17■■□□□ 1.94
U2AF1-201ENST00000291552 GPR158Q5T848 1215 aa27.17■■□□□ 1.94
U2AF1-201ENST00000291552 LMBRD2Q68DH5 695 aaPredicted RBP27.17■■□□□ 1.94
U2AF1-201ENST00000291552 ZC3H14Q6PJT7 736 aaKnown RBP27.17■■□□□ 1.94
U2AF1-201ENST00000291552 OSTM1Q86WC4 334 aa27.17■■□□□ 1.94
U2AF1-201ENST00000291552 LRRC52Q8N7C0 313 aa27.17■■□□□ 1.94
U2AF1-201ENST00000291552 GIPC2Q8TF65 315 aa27.17■■□□□ 1.94
U2AF1-201ENST00000291552 NOC3LQ8WTT2 800 aaKnown RBP27.17■■□□□ 1.94
U2AF1-201ENST00000291552 C2orf15Q8WU43 125 aaKnown RBP27.17■■□□□ 1.94
U2AF1-201ENST00000291552 E2F7Q96AV8 911 aa27.17■■□□□ 1.94
U2AF1-201ENST00000291552 PRMT8Q9NR22 394 aaPredicted RBP27.17■■□□□ 1.94
U2AF1-201ENST00000291552 ITGA11Q9UKX5 1188 aa27.17■■□□□ 1.94
U2AF1-201ENST00000291552 TULP1O00294 542 aaPredicted RBP27.16■■□□□ 1.94
U2AF1-201ENST00000291552 MAN2B1O00754 1011 aa27.16■■□□□ 1.94
U2AF1-201ENST00000291552 CUTAO60888 179 aa27.16■■□□□ 1.94
U2AF1-201ENST00000291552 FGF19O95750 216 aa27.16■■□□□ 1.94
U2AF1-201ENST00000291552 GPR15P49685 360 aa27.16■■□□□ 1.94
U2AF1-201ENST00000291552 CSTF1Q05048 431 aaKnown RBP27.16■■□□□ 1.94
U2AF1-201ENST00000291552 SMARCB1Q12824 385 aa27.16■■□□□ 1.94
U2AF1-201ENST00000291552 BFSP1Q12934 665 aa27.16■■□□□ 1.94
U2AF1-201ENST00000291552 EPM2AIP1Q7L775 607 aaPredicted RBP27.16■■□□□ 1.94
U2AF1-201ENST00000291552 TMEM150AQ86TG1 271 aa27.16■■□□□ 1.94
U2AF1-201ENST00000291552 CBWD2Q8IUF1 395 aa27.16■■□□□ 1.94
U2AF1-201ENST00000291552 GPD1LQ8N335 351 aa27.16■■□□□ 1.94
U2AF1-201ENST00000291552 STKLD1Q8NE28 680 aa27.16■■□□□ 1.94
U2AF1-201ENST00000291552 FAM200AQ8TCP9 573 aa27.16■■□□□ 1.94
U2AF1-201ENST00000291552 KCNG4Q8TDN1 519 aa27.16■■□□□ 1.94
U2AF1-201ENST00000291552 PKMYT1Q99640 499 aa27.16■■□□□ 1.94
U2AF1-201ENST00000291552 CHADO15335 359 aa27.15■■□□□ 1.94
U2AF1-201ENST00000291552 NCAM2O15394 837 aa27.15■■□□□ 1.94
U2AF1-201ENST00000291552 HCRTO43612 131 aa27.15■■□□□ 1.94
U2AF1-201ENST00000291552 MTAPQ13126 283 aa27.15■■□□□ 1.94
U2AF1-201ENST00000291552 VEPH1Q14D04 833 aa27.15■■□□□ 1.94
U2AF1-201ENST00000291552 WDR44Q5JSH3 913 aa27.15■■□□□ 1.94
U2AF1-201ENST00000291552 CNNM4Q6P4Q7 775 aa27.15■■□□□ 1.94
U2AF1-201ENST00000291552 DCP1BQ8IZD4 617 aaKnown RBP27.15■■□□□ 1.94
U2AF1-201ENST00000291552 CSGALNACT2Q8N6G5 542 aa27.15■■□□□ 1.94
U2AF1-201ENST00000291552 SUMF1Q8NBK3 374 aa27.15■■□□□ 1.94
U2AF1-201ENST00000291552 OR5B17Q8NGF7 314 aa27.15■■□□□ 1.94
U2AF1-201ENST00000291552 CACTINQ8WUQ7 758 aaKnown RBP27.15■■□□□ 1.94
U2AF1-201ENST00000291552 FAM3CQ92520 227 aa27.15■■□□□ 1.94
U2AF1-201ENST00000291552 NELL1Q92832 810 aa27.15■■□□□ 1.94
U2AF1-201ENST00000291552 CHRDQ9H2X0 955 aa27.15■■□□□ 1.94
U2AF1-201ENST00000291552 CUEDC2Q9H467 287 aa27.15■■□□□ 1.94
U2AF1-201ENST00000291552 HMGA1P17096 107 aaKnown RBP27.14■■□□□ 1.94
U2AF1-201ENST00000291552 ACAT1P24752 427 aaKnown RBP27.14■■□□□ 1.94
U2AF1-201ENST00000291552 SOX9P48436 509 aa27.14■■□□□ 1.94
U2AF1-201ENST00000291552 ASIC1P78348 528 aa27.14■■□□□ 1.94
U2AF1-201ENST00000291552 FOXD4L6Q3SYB3 417 aaPredicted RBP27.14■■□□□ 1.94
U2AF1-201ENST00000291552 TSSK4Q6SA08 328 aa27.14■■□□□ 1.94
U2AF1-201ENST00000291552 FOXD4L3Q6VB84 417 aaPredicted RBP27.14■■□□□ 1.94
U2AF1-201ENST00000291552 ZFYVE19Q96K21 471 aa27.14■■□□□ 1.94
U2AF1-201ENST00000291552 TASP1Q9H6P5 420 aa27.14■■□□□ 1.94
U2AF1-201ENST00000291552 GDAP2Q9NXN4 497 aa27.14■■□□□ 1.94
U2AF1-201ENST00000291552 PCDHB5Q9Y5E4 795 aa27.14■■□□□ 1.94
U2AF1-201ENST00000291552 CACNA1AO00555 2505 aa27.13■■□□□ 1.93
U2AF1-201ENST00000291552 ZSCAN22P10073 491 aaPredicted RBP27.13■■□□□ 1.93
U2AF1-201ENST00000291552 TDGF1P13385 188 aa27.13■■□□□ 1.93
U2AF1-201ENST00000291552 CCNE1P24864 410 aa27.13■■□□□ 1.93
U2AF1-201ENST00000291552 CASP1P29466 404 aa27.13■■□□□ 1.93
U2AF1-201ENST00000291552 WEE1P30291 646 aa27.13■■□□□ 1.93
U2AF1-201ENST00000291552 CDC25CP30307 473 aa27.13■■□□□ 1.93
U2AF1-201ENST00000291552 TSPY1Q01534 308 aa27.13■■□□□ 1.93
U2AF1-201ENST00000291552 EHHADHQ08426 723 aa27.13■■□□□ 1.93
U2AF1-201ENST00000291552 PKP1Q13835 747 aa27.13■■□□□ 1.93
U2AF1-201ENST00000291552 ARHGAP15Q53QZ3 475 aa27.13■■□□□ 1.93
U2AF1-201ENST00000291552 YAF2Q8IY57 180 aa27.13■■□□□ 1.93
U2AF1-201ENST00000291552 LEO1Q8WVC0 666 aaPredicted RBP27.13■■□□□ 1.93
U2AF1-201ENST00000291552 PI4K2AQ9BTU6 479 aa27.13■■□□□ 1.93
U2AF1-201ENST00000291552 SMG9Q9H0W8 520 aaKnown RBP27.13■■□□□ 1.93
U2AF1-201ENST00000291552 INTS13Q9NVM9 706 aa27.13■■□□□ 1.93
U2AF1-201ENST00000291552 OBP2AQ9NY56 170 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms