RNA–Protein interactions for RNA: ENST00000275223.7

VNN3-201, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-201ENST00000275223 TIPINQ9BVW5 301 aa8.24□□□□□ -1.09
VNN3-201ENST00000275223 LSM14BQ9BX40 385 aaKnown RBP8.24□□□□□ -1.09
VNN3-201ENST00000275223 LRRC3Q9BY71 257 aa8.24□□□□□ -1.09
VNN3-201ENST00000275223 TMEM60Q9H2L4 133 aa8.24□□□□□ -1.09
VNN3-201ENST00000275223 BHMT2Q9H2M3 363 aa8.24□□□□□ -1.09
VNN3-201ENST00000275223 USP20Q9Y2K6 914 aa8.24□□□□□ -1.09
VNN3-201ENST00000275223 YIPF1Q9Y548 306 aa8.24□□□□□ -1.09
VNN3-201ENST00000275223 DOCK8Q8NF50 2099 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 MYH9P35579 1960 aaKnown RBP8.23□□□□□ -1.09
VNN3-201ENST00000275223 A0A1W2PRU2 124 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 SLC38A8A6NNN8 435 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 CCDC169A6NNP5 214 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 SOBPA7XYQ1 873 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 ABLIM1O14639 778 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 RPP40O75818 363 aaKnown RBP8.23□□□□□ -1.09
VNN3-201ENST00000275223 CLSTN1O94985 981 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 PROS1P07225 676 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 TYMPP19971 482 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 LRPAP1P30533 357 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 TRAPPC10P48553 1259 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 SMARCB1Q12824 385 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 GRSF1Q12849 480 aaKnown RBP eCLIP8.23□□□□□ -1.09
VNN3-201ENST00000275223 ITPRIPL2Q3MIP1 535 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 FBXO43Q4G163 708 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 STPG1Q5TH74 334 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 CENPPQ6IPU0 288 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 TXNDC11Q6PKC3 985 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 ZPBP2Q6X784 338 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 Q6ZS52 159 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 USP37Q86T82 979 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 SKAP1Q86WV1 359 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 CEP120Q8N960 986 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 CCDC26Q8TAB7 109 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 KCNN1Q92952 543 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 GTF3C6Q969F1 213 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 HS3ST6Q96QI5 342 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 TMEM209Q96SK2 561 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 KCNK17Q96T54 332 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 RAB34Q9BZG1 259 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 VPS45Q9NRW7 570 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 RBM12Q9NTZ6 932 aaKnown RBP8.23□□□□□ -1.09
VNN3-201ENST00000275223 KIAA1468Q9P260 1216 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 DNM3Q9UQ16 869 aa8.23□□□□□ -1.09
VNN3-201ENST00000275223 TMEM8BA6NDV4 472 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 WNT7AO00755 349 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 TRDMT1O14717 391 aaKnown RBP8.22□□□□□ -1.09
VNN3-201ENST00000275223 CLDN3O15551 220 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 XPOTO43592 962 aaKnown RBP8.22□□□□□ -1.09
VNN3-201ENST00000275223 KCNK5O95279 499 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 CLTAP09496 248 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 GJA1P17302 382 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 CDC25CP30307 473 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 CCT6AP40227 531 aaKnown RBP8.22□□□□□ -1.09
VNN3-201ENST00000275223 TUFMP49411 452 aaKnown RBP8.22□□□□□ -1.09
VNN3-201ENST00000275223 MCM2P49736 904 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 SMTNP53814 917 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 PEX3P56589 373 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 OSTNP61366 133 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 MCL1Q07820 350 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 STRN3Q13033 797 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 DUSP4Q13115 394 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 SRSF5Q13243 272 aaKnown RBP8.22□□□□□ -1.09
VNN3-201ENST00000275223 NOLC1Q14978 699 aaKnown RBP eCLIP8.22□□□□□ -1.09
VNN3-201ENST00000275223 KARSQ15046 597 aaKnown RBP8.22□□□□□ -1.09
VNN3-201ENST00000275223 ZBTB6Q15916 424 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 PTPRNQ16849 979 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 SLC10A6Q3KNW5 377 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 TMEM196Q5HYL7 178 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 HEATR6Q6AI08 1181 aaKnown RBP8.22□□□□□ -1.09
VNN3-201ENST00000275223 ARMCX5Q6P1M9 558 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 GAREM2Q75VX8 874 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 DNAJB7Q7Z6W7 309 aaPredicted RBP8.22□□□□□ -1.09
VNN3-201ENST00000275223 C11orf74Q86VG3 221 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 KDF1Q8NAX2 398 aaPredicted RBP8.22□□□□□ -1.09
VNN3-201ENST00000275223 NSUN7Q8NE18 718 aaKnown RBP8.22□□□□□ -1.09
VNN3-201ENST00000275223 BPIFB1Q8TDL5 484 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 C18orf25Q96B23 403 aaPredicted RBP8.22□□□□□ -1.09
VNN3-201ENST00000275223 RSPRY1Q96DX4 576 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 USB1Q9BQ65 265 aaKnown RBP8.22□□□□□ -1.09
VNN3-201ENST00000275223 MKNK1Q9BUB5 465 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 TARS2Q9BW92 718 aaKnown RBP8.22□□□□□ -1.09
VNN3-201ENST00000275223 DNAJC25Q9H1X3 360 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 ARRDC1-AS1Q9H2J1 176 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 FOXP1Q9H334 677 aaPredicted RBP8.22□□□□□ -1.09
VNN3-201ENST00000275223 ATXN3LQ9H3M9 355 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 TASP1Q9H6P5 420 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 KMT5AQ9NQR1 393 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.22□□□□□ -1.09
VNN3-201ENST00000275223 CUEDC1Q9NWM3 386 aaPredicted RBP8.22□□□□□ -1.09
VNN3-201ENST00000275223 GTSE1Q9NYZ3 720 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 KCND2Q9NZV8 630 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 LRWD1Q9UFC0 647 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 UBQLN1Q9UMX0 589 aaKnown RBP8.22□□□□□ -1.09
VNN3-201ENST00000275223 LHX6Q9UPM6 363 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 SLC8A2Q9UPR5 921 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 KIAA1024Q9UPX6 916 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 NCANO14594 1321 aa8.22□□□□□ -1.09
VNN3-201ENST00000275223 FASNP49327 2511 aaKnown RBP8.22□□□□□ -1.09
VNN3-201ENST00000275223 LAMA1P25391 3075 aa8.21□□□□□ -1.09
VNN3-201ENST00000275223 BAHCC1Q9P281 2608 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms