RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 MED4Q9NPJ6 270 aa13.3□□□□□ -0.28
CAPN9-201ENST00000271971 SAR1BQ9Y6B6 198 aa13.3□□□□□ -0.28
CAPN9-201ENST00000271971 A0A0U1RQF3 1178 aa13.3□□□□□ -0.28
CAPN9-201ENST00000271971 XPOTO43592 962 aaKnown RBP13.3□□□□□ -0.28
CAPN9-201ENST00000271971 INCA1Q0VD86 236 aa13.3□□□□□ -0.28
CAPN9-201ENST00000271971 FOXR1Q6PIV2 292 aa13.3□□□□□ -0.28
CAPN9-201ENST00000271971 MRPL10Q7Z7H8 261 aaKnown RBP13.3□□□□□ -0.28
CAPN9-201ENST00000271971 DAAM2Q86T65 1068 aa13.3□□□□□ -0.28
CAPN9-201ENST00000271971 PACS2Q86VP3 889 aa13.3□□□□□ -0.28
CAPN9-201ENST00000271971 USP38Q8NB14 1042 aa13.3□□□□□ -0.28
CAPN9-201ENST00000271971 BTBD6Q96KE9 485 aa13.3□□□□□ -0.28
CAPN9-201ENST00000271971 VPS18Q9P253 973 aa13.3□□□□□ -0.28
CAPN9-201ENST00000271971 CNOT8Q9UFF9 292 aaKnown RBP13.3□□□□□ -0.28
CAPN9-201ENST00000271971 BARX2Q9UMQ3 279 aaPredicted RBP13.3□□□□□ -0.28
CAPN9-201ENST00000271971 INPP5FQ9Y2H2 1132 aa13.3□□□□□ -0.28
CAPN9-201ENST00000271971 CASTOR2A6NHX0 329 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 POMCP01189 267 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 SELPP16109 830 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 RRM1P23921 792 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 RAB27AP51159 221 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 WHAMMP3Q1A5X7 153 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 SOWAHAQ2M3V2 549 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 DENND1BQ6P3S1 775 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 MMS22LQ6ZRQ5 1243 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 MON1BQ7L1V2 547 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 RTN4RL1Q86UN2 441 aaPredicted RBP13.29□□□□□ -0.28
CAPN9-201ENST00000271971 MCOLN2Q8IZK6 566 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 CAGE1Q8TC20 777 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 COG1Q8WTW3 980 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 TMEM176AQ96HP8 235 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 FAXDC2Q96IV6 333 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 ZNF560Q96MR9 790 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 PAAF1Q9BRP4 392 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 NUP85Q9BW27 656 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 VIPAS39Q9H9C1 493 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 RSAD1Q9HA92 442 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 GTF3C4Q9UKN8 822 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 SNX12Q9UMY4 172 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 TMEM110-MUSTN1A8MSY1 372 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 KPNA7A9QM74 516 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 NBNO60934 754 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 ZNF623O75123 536 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 CPP00450 1065 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 THP07101 528 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 HSPA8P11142 646 aaKnown RBP13.29□□□□□ -0.28
CAPN9-201ENST00000271971 CYP3A5P20815 502 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 TAF6P49848 677 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 GPNMBQ14956 572 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 IFI16Q16666 785 aaKnown RBP13.29□□□□□ -0.28
CAPN9-201ENST00000271971 MEI1Q5TIA1 1274 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 TRIM72Q6ZMU5 477 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 C12orf29Q8N999 325 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 ZNF333Q96JL9 665 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 TRAIPQ9BWF2 469 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 GIT1Q9Y2X7 761 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 SQORQ9Y6N5 450 aa13.29□□□□□ -0.28
CAPN9-201ENST00000271971 LAMA2P24043 3122 aaKnown RBP13.29□□□□□ -0.28
CAPN9-201ENST00000271971 CYP1A2P05177 515 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 PAEPP09466 180 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 FGFR1P11362 822 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 CLCNKBP51801 687 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 CORO7P57737 925 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 LILRA4P59901 499 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 CTU1Q7Z7A3 348 aaKnown RBP13.28□□□□□ -0.28
CAPN9-201ENST00000271971 ECHDC2Q86YB7 292 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 CPNE8Q86YQ8 564 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 RHOT2Q8IXI1 618 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 C3orf58Q8NDZ4 430 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 ZNF564Q8TBZ8 553 aaPredicted RBP13.28□□□□□ -0.28
CAPN9-201ENST00000271971 HEXIM2Q96MH2 286 aaKnown RBP13.28□□□□□ -0.28
CAPN9-201ENST00000271971 OSBPL9Q96SU4 736 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 LPIN3Q9BQK8 851 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 TRIM7Q9C029 511 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 TSPYL2Q9H2G4 693 aaPredicted RBP13.28□□□□□ -0.28
CAPN9-201ENST00000271971 DPEP3Q9H4B8 488 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 SMARCAL1Q9NZC9 954 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 EHD2Q9NZN4 543 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 GJB6O95452 261 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 LRPAP1P30533 357 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 TTC31Q49AM3 519 aaPredicted RBP13.28□□□□□ -0.28
CAPN9-201ENST00000271971 WDR93Q6P2C0 686 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 ACOT1Q86TX2 421 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 ZNF598Q86UK7 904 aaKnown RBP13.28□□□□□ -0.28
CAPN9-201ENST00000271971 WDTC1Q8N5D0 677 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 OR6B3Q8NGW1 331 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 KBTBD7Q8WVZ9 684 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 PPM1EQ8WY54 764 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 SCLYQ96I15 445 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 TSPAN18Q96SJ8 248 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 NT5C1AQ9BXI3 368 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 ABCB6Q9NP58 842 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 ADAM22Q9P0K1 906 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 PCDH10Q9P2E7 1040 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 CYTH4Q9UIA0 394 aa13.28□□□□□ -0.28
CAPN9-201ENST00000271971 AARSP49588 968 aaKnown RBP eCLIP13.27□□□□□ -0.29
CAPN9-201ENST00000271971 CDR1P51861 262 aa13.27□□□□□ -0.29
CAPN9-201ENST00000271971 LBX1P52954 281 aa13.27□□□□□ -0.29
CAPN9-201ENST00000271971 PTP4A2Q12974 167 aa13.27□□□□□ -0.29
CAPN9-201ENST00000271971 BFSP2Q13515 415 aa13.27□□□□□ -0.29
CAPN9-201ENST00000271971 TRIM60Q495X7 471 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms