RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 ATP1A3P13637 1013 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 P4HA1P13674 534 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 PSMC1P62191 440 aaKnown RBP13.64□□□□□ -0.23
SS18-202ENST00000269138 ADCY1Q08828 1119 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 GPR17Q13304 367 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 SLC39A12Q504Y0 691 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 WDR44Q5JSH3 913 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 LUZP1Q86V48 1076 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 ATAD1Q8NBU5 361 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 SPATA18Q8TC71 538 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 MSLNLQ96KJ4 702 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 PKMYT1Q99640 499 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 ARID3AQ99856 593 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 ACBD6Q9BR61 282 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 OXCT2Q9BYC2 517 aaPredicted RBP13.64□□□□□ -0.23
SS18-202ENST00000269138 INTS2Q9H0H0 1204 aaKnown RBP13.64□□□□□ -0.23
SS18-202ENST00000269138 VPS16Q9H269 839 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 CRISPLD1Q9H336 500 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 NDST4Q9H3R1 872 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 DPEP3Q9H4B8 488 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 HMGXB4Q9UGU5 601 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 CDH22Q9UJ99 828 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 PLXNA3P51805 1871 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 FSD2A1L4K1 749 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 MYBPHLA2RUH7 354 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 SMTNL1A8MU46 457 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 FAM163BP0C2L3 166 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 SLC9A1P19634 815 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 APBA1Q02410 837 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 ORC1Q13415 861 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 INTS6LQ5JSJ4 861 aaKnown RBP13.64□□□□□ -0.23
SS18-202ENST00000269138 RARS2Q5T160 578 aaKnown RBP13.64□□□□□ -0.23
SS18-202ENST00000269138 TPGS2Q68CL5 300 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 ARHGEF19Q8IW93 802 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 TTC9BQ8N6N2 239 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 KAT5Q92993 513 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 SYT15Q9BQS2 421 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 S1PR5Q9H228 398 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 CRTAC1Q9NQ79 661 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 LIMA1Q9UHB6 759 aaKnown RBP13.64□□□□□ -0.23
SS18-202ENST00000269138 AFF4Q9UHB7 1163 aaKnown RBP13.64□□□□□ -0.23
SS18-202ENST00000269138 GTF3C4Q9UKN8 822 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 COG5Q9UP83 839 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 BRWD1Q9NSI6 2320 aa13.64□□□□□ -0.23
SS18-202ENST00000269138 COL6A3P12111 3177 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 PRUNE2Q8WUY3 3088 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 MTMR11A4FU01 709 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 A8MXQ7 604 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 PES1O00541 588 aaKnown RBP13.63□□□□□ -0.23
SS18-202ENST00000269138 C1RP00736 705 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 SRGAP2BP0DMP2 458 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 ATF2P15336 505 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 CD58P19256 250 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 CDK11BP21127 795 aaKnown RBP13.63□□□□□ -0.23
SS18-202ENST00000269138 PCSK1P29120 753 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 COPB1P53618 953 aaKnown RBP13.63□□□□□ -0.23
SS18-202ENST00000269138 TSPY1Q01534 308 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 CETN1Q12798 172 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 LRSAM1Q6UWE0 723 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 TMC5Q6UXY8 1006 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 APTXQ7Z2E3 356 aaKnown RBP13.63□□□□□ -0.23
SS18-202ENST00000269138 DCP1BQ8IZD4 617 aaKnown RBP13.63□□□□□ -0.23
SS18-202ENST00000269138 SLC7A14Q8TBB6 771 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 NT5C1BQ96P26 610 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 TWNKQ96RR1 684 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 PLEKHA4Q9H4M7 779 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 CYP3A43Q9HB55 503 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 CYP4F11Q9HBI6 524 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 DZANK1Q9NVP4 752 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 GCNT4Q9P109 453 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 CD207Q9UJ71 328 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 CDH9Q9ULB4 789 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 SLC27A5Q9Y2P5 690 aa13.63□□□□□ -0.23
SS18-202ENST00000269138 SPDYE4A6NLX3 237 aa13.62□□□□□ -0.23
SS18-202ENST00000269138 BECN2A8MW95 431 aa13.62□□□□□ -0.23
SS18-202ENST00000269138 ZMYND10O75800 440 aa13.62□□□□□ -0.23
SS18-202ENST00000269138 SOAT2O75908 522 aa13.62□□□□□ -0.23
SS18-202ENST00000269138 C8AP07357 584 aa13.62□□□□□ -0.23
SS18-202ENST00000269138 PTPN1P18031 435 aaKnown RBP13.62□□□□□ -0.23
SS18-202ENST00000269138 PON1P27169 355 aa13.62□□□□□ -0.23
SS18-202ENST00000269138 ELF1P32519 619 aa13.62□□□□□ -0.23
SS18-202ENST00000269138 NDST1P52848 882 aa13.62□□□□□ -0.23
SS18-202ENST00000269138 DUSP4Q13115 394 aa13.62□□□□□ -0.23
SS18-202ENST00000269138 CUL2Q13617 745 aa13.62□□□□□ -0.23
SS18-202ENST00000269138 PHLDB3Q6NSJ2 640 aa13.62□□□□□ -0.23
SS18-202ENST00000269138 FAM171BQ6P995 826 aa13.62□□□□□ -0.23
SS18-202ENST00000269138 GJB7Q6PEY0 223 aa13.62□□□□□ -0.23
SS18-202ENST00000269138 GBP6Q6ZN66 633 aa13.62□□□□□ -0.23
SS18-202ENST00000269138 RRAGAQ7L523 313 aa13.62□□□□□ -0.23
SS18-202ENST00000269138 TCEAL8Q8IYN2 117 aa13.62□□□□□ -0.23
SS18-202ENST00000269138 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.62□□□□□ -0.23
SS18-202ENST00000269138 WHAMMQ8TF30 809 aa13.62□□□□□ -0.23
SS18-202ENST00000269138 HDAC7Q8WUI4 952 aa13.62□□□□□ -0.23
SS18-202ENST00000269138 TSPY26PQ9H489 355 aa13.62□□□□□ -0.23
SS18-202ENST00000269138 CCDC195A0A1B0GUA6 201 aa13.61□□□□□ -0.23
SS18-202ENST00000269138 GTPBP10A4D1E9 387 aaKnown RBP13.61□□□□□ -0.23
SS18-202ENST00000269138 GRXCR2A6NFK2 248 aa13.61□□□□□ -0.23
SS18-202ENST00000269138 LRRC10BA6NIK2 292 aa13.61□□□□□ -0.23
SS18-202ENST00000269138 PRRG1O14668 218 aa13.61□□□□□ -0.23
SS18-202ENST00000269138 CCL16O15467 120 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms