RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 APOBEC3HQ6NTF7 200 aaKnown RBP13.81□□□□□ -0.2
NUP54-201ENST00000264883 RIPOR1Q6ZS17 1223 aa13.81□□□□□ -0.2
NUP54-201ENST00000264883 NCCRP1Q6ZVX7 275 aaPredicted RBP13.81□□□□□ -0.2
NUP54-201ENST00000264883 C1orf186Q6ZWK4 172 aa13.81□□□□□ -0.2
NUP54-201ENST00000264883 LRRC6Q86X45 466 aa13.81□□□□□ -0.2
NUP54-201ENST00000264883 OR6Y1Q8NGX8 325 aa13.81□□□□□ -0.2
NUP54-201ENST00000264883 CCDC110Q8TBZ0 833 aa13.81□□□□□ -0.2
NUP54-201ENST00000264883 PRR11Q96HE9 360 aaPredicted RBP13.81□□□□□ -0.2
NUP54-201ENST00000264883 AGPAT3Q9NRZ7 376 aa13.81□□□□□ -0.2
NUP54-201ENST00000264883 YDJCA8MPS7 323 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 POC1B-GALNT4F8VUJ3 575 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 DNAJC6O75061 913 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 FTLP02792 175 aaPredicted RBP13.8□□□□□ -0.2
NUP54-201ENST00000264883 CDK4P11802 303 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 ZNF24P17028 368 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 PIK3CAP42336 1068 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 ARFIP2P53365 341 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 ASPHQ12797 758 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 ALCAMQ13740 583 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 SLC44A4Q53GD3 710 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 CYP4F22Q6NT55 531 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 RAPH1Q70E73 1250 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 ZNF720Q7Z2F6 126 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 PDSS2Q86YH6 399 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 CD101Q93033 1021 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 TRIM55Q9BYV6 548 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 SPON1Q9HCB6 807 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 FBXO6Q9NRD1 293 aaPredicted RBP13.8□□□□□ -0.2
NUP54-201ENST00000264883 ZDHHC7Q9NXF8 308 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 SENP1Q9P0U3 644 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 COL4A5P29400 1685 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 VILLO15195 856 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 PMM2O15305 246 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 CLDN3O15551 220 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 SPOPO43791 374 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 FUT4P22083 530 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 GCAP28676 217 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 PTGER2P43116 358 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 VPS41P49754 854 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 CDK16Q00536 496 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 TRMT5Q32P41 509 aaKnown RBP13.8□□□□□ -0.2
NUP54-201ENST00000264883 CBWD6Q4V339 395 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 SH3D19Q5HYK7 790 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 CBWD3Q5JTY5 395 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 CBWD5Q5RIA9 395 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 RBM44Q6ZP01 1051 aaKnown RBP13.8□□□□□ -0.2
NUP54-201ENST00000264883 FAM178BQ8IXR5 827 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 DIS3LQ8TF46 1054 aaKnown RBP13.8□□□□□ -0.2
NUP54-201ENST00000264883 GRK7Q8WTQ7 553 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 TEKT1Q969V4 418 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 SKA1Q96BD8 255 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 MAML3Q96JK9 1138 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 PANX3Q96QZ0 392 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 HSD17B14Q9BPX1 270 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 TIMMDC1Q9NPL8 285 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 DDX18Q9NVP1 670 aaKnown RBP13.8□□□□□ -0.2
NUP54-201ENST00000264883 BTBD7Q9P203 1132 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 UVRAGQ9P2Y5 699 aa13.8□□□□□ -0.2
NUP54-201ENST00000264883 LOXHD1Q8IVV2 1947 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 WDR91A4D1P6 747 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 MAGEB3O15480 346 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 BUD23O43709 281 aaKnown RBP13.79□□□□□ -0.2
NUP54-201ENST00000264883 E2F6O75461 281 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 ABHD2P08910 425 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 UQCRBP14927 111 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 ZFXP17010 805 aaPredicted RBP13.79□□□□□ -0.2
NUP54-201ENST00000264883 CD97P48960 835 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 SCNN1DP51172 638 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 KCNA1Q09470 495 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 DCTN2Q13561 401 aaKnown RBP13.79□□□□□ -0.2
NUP54-201ENST00000264883 SYDE2Q5VT97 1194 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 SLFN13Q68D06 897 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 FBXO11Q86XK2 927 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 CLEC10AQ8IUN9 316 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 ZDHHC15Q96MV8 337 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 PPM1HQ9ULR3 514 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 CCDC160A6NGH7 325 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 B2RBV5 119 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 FAM86B1E9PN63 330 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 PIK3CDO00329 1044 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 TYROBPO43914 113 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 ZBED4O75132 1171 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 PGM3O95394 542 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 FAM86B2P0C5J1 330 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 VARSP26640 1264 aaKnown RBP13.79□□□□□ -0.2
NUP54-201ENST00000264883 NMT1P30419 496 aaKnown RBP13.79□□□□□ -0.2
NUP54-201ENST00000264883 CRKP46108 304 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 CPA2P48052 419 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 GJA8P48165 433 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 ACTR3P61158 418 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 BTG3Q14201 252 aaPredicted RBP13.79□□□□□ -0.2
NUP54-201ENST00000264883 ARHGAP44Q17R89 818 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 LMO3Q8TAP4 145 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 PIP4K2CQ8TBX8 421 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 CFAP57Q96MR6 1250 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 USP29Q9HBJ7 922 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 ARHGEF38Q9NXL2 777 aa13.79□□□□□ -0.2
NUP54-201ENST00000264883 CHORDC1Q9UHD1 332 aaPredicted RBP13.79□□□□□ -0.2
NUP54-201ENST00000264883 MTO1Q9Y2Z2 717 aaKnown RBP13.79□□□□□ -0.2
NUP54-201ENST00000264883 ZNF536O15090 1300 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms