RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 CHUKO15111 745 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 RARGP13631 454 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 ARL4AP40617 200 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 SPARCL1Q14515 664 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 METTL7BQ6UX53 244 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 C3orf62Q6ZUJ4 267 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 ACTL9Q8TC94 416 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 MAP3K20Q9NYL2 800 aaKnown RBP13.21□□□□□ -0.29
HERC6-201ENST00000264346 PNMA3Q9UL41 463 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 COMMD10Q9Y6G5 202 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 ADGRA3Q8IWK6 1321 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 CNTNAP1P78357 1384 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 ATRNL1Q5VV63 1379 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 DDX3YO15523 660 aaKnown RBP13.21□□□□□ -0.29
HERC6-201ENST00000264346 CDH16O75309 829 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 STAG3L1P0CL83 205 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 FNTAP49354 379 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 TAS2R40P59535 323 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 OTUD4Q01804 1114 aaKnown RBP13.21□□□□□ -0.29
HERC6-201ENST00000264346 GCNT1Q02742 428 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 EEF1DP3Q658K8 133 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 CCDC62Q6P9F0 684 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 OR6J1Q8NGC5 347 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 AGAP3Q96P47 875 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 AP5M1Q9H0R1 490 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 PORCNQ9H237 461 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 PDGFCQ9NRA1 345 aa13.21□□□□□ -0.29
HERC6-201ENST00000264346 R3HDM2Q9Y2K5 976 aaKnown RBP13.21□□□□□ -0.29
HERC6-201ENST00000264346 ZNF541Q9H0D2 1346 aa13.21□□□□□ -0.3
HERC6-201ENST00000264346 NFKBIEO00221 500 aa13.21□□□□□ -0.3
HERC6-201ENST00000264346 NCKAP1LP55160 1127 aa13.21□□□□□ -0.3
HERC6-201ENST00000264346 FOXR2Q6PJQ5 311 aa13.21□□□□□ -0.3
HERC6-201ENST00000264346 TRMT10CQ7L0Y3 403 aaKnown RBP13.21□□□□□ -0.3
HERC6-201ENST00000264346 EXOC8Q8IYI6 725 aa13.21□□□□□ -0.3
HERC6-201ENST00000264346 SIX6OS1Q8N1H7 587 aa13.21□□□□□ -0.3
HERC6-201ENST00000264346 NLGN2Q8NFZ4 835 aa13.21□□□□□ -0.3
HERC6-201ENST00000264346 HELQQ8TDG4 1101 aa13.21□□□□□ -0.3
HERC6-201ENST00000264346 C7orf43Q8WVR3 580 aa13.21□□□□□ -0.3
HERC6-201ENST00000264346 SPDL1Q96EA4 605 aa13.21□□□□□ -0.3
HERC6-201ENST00000264346 HES2Q9Y543 173 aa13.21□□□□□ -0.3
HERC6-201ENST00000264346 BTAF1O14981 1849 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 KCNA2P16389 499 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 PCK1P35558 622 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 CHKAP35790 457 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 ROR1Q01973 937 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 PSMD6Q15008 389 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 C6orf163Q5TEZ5 329 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 TTC27Q6P3X3 843 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 SUGP1Q8IWZ8 645 aaKnown RBP13.2□□□□□ -0.3
HERC6-201ENST00000264346 OPTNQ96CV9 577 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 PPP1R12CQ9BZL4 782 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 PLCH1Q4KWH8 1693 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 RIPK2O43353 540 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 HBP1O60381 514 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 CFHP08603 1231 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 CYP2B6P20813 491 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 SESN2P58004 480 aaPredicted RBP13.2□□□□□ -0.3
HERC6-201ENST00000264346 ZACNQ401N2 412 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 ARMC3Q5W041 872 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 RFX8Q6ZV50 586 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 CCHCR1Q8TD31 782 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 KLRG1Q96E93 195 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 GPRC5DQ9NZD1 345 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 TPX2Q9ULW0 747 aaKnown RBP13.2□□□□□ -0.3
HERC6-201ENST00000264346 SYNPO2Q9UMS6 1093 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 O00370 1275 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 BANF1O75531 89 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 CHRNB2P17787 502 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 PLCB4Q15147 1175 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 MAP1SQ66K74 1059 aaPredicted RBP13.2□□□□□ -0.3
HERC6-201ENST00000264346 MPZL3Q6UWV2 235 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 STMN2Q93045 179 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 YIPF3Q9GZM5 350 aa13.2□□□□□ -0.3
HERC6-201ENST00000264346 PIH1D1Q9NWS0 290 aaKnown RBP13.2□□□□□ -0.3
HERC6-201ENST00000264346 XPO7Q9UIA9 1087 aaKnown RBP13.2□□□□□ -0.3
HERC6-201ENST00000264346 DDX60Q8IY21 1712 aaKnown RBP13.19□□□□□ -0.3
HERC6-201ENST00000264346 CTCFP49711 727 aaPredicted RBP13.19□□□□□ -0.3
HERC6-201ENST00000264346 CAV1Q03135 178 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 TFDP2Q14188 446 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 PIGHQ14442 188 aaPredicted RBP13.19□□□□□ -0.3
HERC6-201ENST00000264346 FASTKD5Q7L8L6 764 aaKnown RBP13.19□□□□□ -0.3
HERC6-201ENST00000264346 ZNF677Q86XU0 584 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 CAMKK2Q96RR4 588 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 GMLQ99445 158 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 DCLK3Q9C098 648 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 ETNK1Q9HBU6 452 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 A0A1B0GUL6 1792 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 NAV1Q8NEY1 1877 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 CCL15-CCL14A0A0B4J2E2 113 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 SP2Q02086 613 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 TNFAIP2Q03169 654 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 ITKQ08881 620 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 OVGP1Q12889 678 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 CCL15Q16663 113 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 ERO1BQ86YB8 467 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 KCNV2Q8TDN2 545 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 SETD4Q9NVD3 440 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 SLC5A4Q9NY91 659 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 MARCOQ9UEW3 520 aaPredicted RBP13.19□□□□□ -0.3
HERC6-201ENST00000264346 ZNF214Q9UL59 606 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms