RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.58□□□□□ -0.4
SMG6-201ENST00000263073 PCDHA10Q9Y5I2 948 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 RBP3P10745 1247 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 IRF1P10914 325 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 EML3Q32P44 896 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 CIAPIN1Q6FI81 312 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 PLEKHM3Q6ZWE6 761 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 SLC13A5Q86YT5 568 aaPredicted RBP12.58□□□□□ -0.4
SMG6-201ENST00000263073 PABPC3Q9H361 631 aaKnown RBP12.58□□□□□ -0.4
SMG6-201ENST00000263073 RPAP3Q9H6T3 665 aaPredicted RBP12.58□□□□□ -0.4
SMG6-201ENST00000263073 NLRP1Q9C000 1473 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 C16orf96A6NNT2 1141 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 LZTS3O60299 673 aaPredicted RBP12.57□□□□□ -0.4
SMG6-201ENST00000263073 MAPK7Q13164 816 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 GPR141Q7Z602 305 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 COL23A1Q86Y22 540 aaPredicted RBP12.57□□□□□ -0.4
SMG6-201ENST00000263073 AGBL1Q96MI9 1066 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 POP1Q99575 1024 aaKnown RBP12.57□□□□□ -0.4
SMG6-201ENST00000263073 SH3GL2Q99962 352 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 TUFT1Q9NNX1 390 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 RCAN1P53805 252 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 CRYMQ14894 314 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 PLEKHA7Q6IQ23 1121 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 SHCBP1Q8NEM2 672 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 PAWRQ96IZ0 340 aaKnown RBP12.57□□□□□ -0.4
SMG6-201ENST00000263073 MPP4Q96JB8 637 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 GCNAQ96QF7 691 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 CDC42EP4Q9H3Q1 356 aaKnown RBP12.57□□□□□ -0.4
SMG6-201ENST00000263073 NPHP4O75161 1426 aaPredicted RBP12.57□□□□□ -0.4
SMG6-201ENST00000263073 PON1P27169 355 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 BMPR2Q13873 1038 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 ANGPT1Q15389 498 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 ATPAF2Q8N5M1 289 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 SLC7A14Q8TBB6 771 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 JPH1Q9HDC5 661 aaPredicted RBP12.57□□□□□ -0.4
SMG6-201ENST00000263073 GPATCH2LQ9NWQ4 482 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 PIH1D1Q9NWS0 290 aaKnown RBP12.57□□□□□ -0.4
SMG6-201ENST00000263073 MRPL42Q9Y6G3 142 aaKnown RBP12.57□□□□□ -0.4
SMG6-201ENST00000263073 CYTH3O43739 400 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 CPB1P15086 417 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 ZNF23P17027 643 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 ITIH4Q14624 930 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 PPIL6Q8IXY8 311 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 LRRC71Q8N4P6 559 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 DDHD1Q8NEL9 900 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 MAGEB18Q96M61 343 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 SIKE1Q9BRV8 207 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 KCTD10Q9H3F6 313 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 PKP3Q9Y446 797 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 NRKQ7Z2Y5 1582 aa12.57□□□□□ -0.4
SMG6-201ENST00000263073 CNTNAP5Q8WYK1 1306 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 FOXN3O00409 490 aaPredicted RBP12.56□□□□□ -0.4
SMG6-201ENST00000263073 USP1O94782 785 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 ITGA4P13612 1032 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 DMPKQ09013 629 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 GALNTL6Q49A17 601 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 FAM180AQ6UWF9 173 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 MFN1Q8IWA4 741 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 SNX31Q8N9S9 440 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 FBXO25Q8TCJ0 367 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 SERPINB12Q96P63 405 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 QTRT2Q9H974 415 aaKnown RBP12.56□□□□□ -0.4
SMG6-201ENST00000263073 GRID1Q9ULK0 1009 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 PIN4Q9Y237 131 aaKnown RBP12.56□□□□□ -0.4
SMG6-201ENST00000263073 CAB39Q9Y376 341 aaPredicted RBP12.56□□□□□ -0.4
SMG6-201ENST00000263073 ARIH2O95376 493 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 ALBP02768 609 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 ACADSP16219 412 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 PIGHQ14442 188 aaPredicted RBP12.56□□□□□ -0.4
SMG6-201ENST00000263073 DCAF6Q58WW2 860 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 C11orf96Q7Z7L8 435 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 NEDD1Q8NHV4 660 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 FAM167AQ96KS9 214 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 TMEM121Q9BTD3 319 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 RUSC1Q9BVN2 902 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 MED14O60244 1454 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 DYTNA2CJ06 578 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 HSPA1AP0DMV8 641 aaKnown RBP12.56□□□□□ -0.4
SMG6-201ENST00000263073 HSPA1BP0DMV9 641 aaKnown RBP12.56□□□□□ -0.4
SMG6-201ENST00000263073 SOAT1P35610 550 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 CDK17Q00537 523 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 LRRC8BQ6P9F7 803 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 ZC3H15Q8WU90 426 aaKnown RBP12.56□□□□□ -0.4
SMG6-201ENST00000263073 GFM2Q969S9 779 aaKnown RBP12.56□□□□□ -0.4
SMG6-201ENST00000263073 ZSWIM1Q9BR11 485 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 TRPC7Q9HCX4 862 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 LATS2Q9NRM7 1088 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 DNAJC16Q9Y2G8 782 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 CROCC2H7BZ55 1655 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 RFX7Q2KHR2 1363 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 ABCC3O15438 1527 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 RARBP10826 455 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 CACNA2D1P54289 1103 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 NPEPPSP55786 919 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 KCNK10P57789 538 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 GTF2H3Q13889 308 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 GOLGA7BQ2TAP0 167 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 SEMA4DQ92854 862 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 DCUN1D5Q9BTE7 237 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 FAM129AQ9BZQ8 928 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms