RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 LRRC15Q8TF66 581 aa13.19□□□□□ -0.3
TRAF4-202ENST00000262396 EXOC4Q96A65 974 aa13.19□□□□□ -0.3
TRAF4-202ENST00000262396 ANKRD36BP1Q96IX9 119 aa13.19□□□□□ -0.3
TRAF4-202ENST00000262396 ZFYVE19Q96K21 471 aa13.19□□□□□ -0.3
TRAF4-202ENST00000262396 PI4K2AQ9BTU6 479 aa13.19□□□□□ -0.3
TRAF4-202ENST00000262396 ZSCAN16Q9H4T2 348 aaPredicted RBP13.19□□□□□ -0.3
TRAF4-202ENST00000262396 PCIF1Q9H4Z3 704 aa13.19□□□□□ -0.3
TRAF4-202ENST00000262396 ZMYM5Q9UJ78 669 aa13.19□□□□□ -0.3
TRAF4-202ENST00000262396 FBXO2Q9UK22 296 aaPredicted RBP13.19□□□□□ -0.3
TRAF4-202ENST00000262396 MYO15AQ9UKN7 3530 aa13.19□□□□□ -0.3
TRAF4-202ENST00000262396 MIA3Q5JRA6 1907 aa13.19□□□□□ -0.3
TRAF4-202ENST00000262396 SPECC1L-ADORA2AF8WAN1 911 aa13.18□□□□□ -0.3
TRAF4-202ENST00000262396 TNNC2P02585 160 aa13.18□□□□□ -0.3
TRAF4-202ENST00000262396 HAPLN1P10915 354 aaPredicted RBP13.18□□□□□ -0.3
TRAF4-202ENST00000262396 SYT1P21579 422 aa13.18□□□□□ -0.3
TRAF4-202ENST00000262396 GARTP22102 1010 aa13.18□□□□□ -0.3
TRAF4-202ENST00000262396 SOX9P48436 509 aa13.18□□□□□ -0.3
TRAF4-202ENST00000262396 RBP5P82980 135 aa13.18□□□□□ -0.3
TRAF4-202ENST00000262396 AMPD3Q01432 767 aa13.18□□□□□ -0.3
TRAF4-202ENST00000262396 MYO1EQ12965 1108 aa13.18□□□□□ -0.3
TRAF4-202ENST00000262396 CUL4AQ13619 759 aa13.18□□□□□ -0.3
TRAF4-202ENST00000262396 DGKKQ5KSL6 1271 aa13.18□□□□□ -0.3
TRAF4-202ENST00000262396 HEATR6Q6AI08 1181 aaKnown RBP13.18□□□□□ -0.3
TRAF4-202ENST00000262396 POTEHQ6S545 545 aa13.18□□□□□ -0.3
TRAF4-202ENST00000262396 GAREM2Q75VX8 874 aa13.18□□□□□ -0.3
TRAF4-202ENST00000262396 RALGPS2Q86X27 583 aaPredicted RBP13.18□□□□□ -0.3
TRAF4-202ENST00000262396 SPATA2LQ8IUW3 424 aaPredicted RBP13.18□□□□□ -0.3
TRAF4-202ENST00000262396 RMDN1Q96DB5 314 aa13.18□□□□□ -0.3
TRAF4-202ENST00000262396 ZNF396Q96N95 335 aaPredicted RBP13.18□□□□□ -0.3
TRAF4-202ENST00000262396 FIZ1Q96SL8 496 aa13.18□□□□□ -0.3
TRAF4-202ENST00000262396 TRPC7Q9HCX4 862 aa13.18□□□□□ -0.3
TRAF4-202ENST00000262396 PRMT8Q9NR22 394 aaPredicted RBP13.18□□□□□ -0.3
TRAF4-202ENST00000262396 DDX43Q9NXZ2 648 aaKnown RBP13.18□□□□□ -0.3
TRAF4-202ENST00000262396 OBP2AQ9NY56 170 aa13.18□□□□□ -0.3
TRAF4-202ENST00000262396 CDV3Q9UKY7 258 aaKnown RBP13.18□□□□□ -0.3
TRAF4-202ENST00000262396 STYXL1Q9Y6J8 313 aa13.18□□□□□ -0.3
TRAF4-202ENST00000262396 NRG2O14511 850 aaPredicted RBP13.17□□□□□ -0.3
TRAF4-202ENST00000262396 EXTL3O43909 919 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 VNN2O95498 520 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 CSH1P0DML2 217 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 CSH2P0DML3 217 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 DDX6P26196 483 aaKnown RBP eCLIP13.17□□□□□ -0.35e-6■□□□□ 11.1
TRAF4-202ENST00000262396 MLLT6P55198 1093 aaPredicted RBP13.17□□□□□ -0.3
TRAF4-202ENST00000262396 LMNB2Q03252 620 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 FCHO2Q0JRZ9 810 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 RESTQ13127 1097 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 SIM2Q14190 667 aaPredicted RBP13.17□□□□□ -0.3
TRAF4-202ENST00000262396 PON2Q15165 354 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 RSPO4Q2I0M5 234 aaPredicted RBP13.17□□□□□ -0.3
TRAF4-202ENST00000262396 ITPRIPL2Q3MIP1 535 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.17□□□□□ -0.3
TRAF4-202ENST00000262396 BRSK2Q8IWQ3 736 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 SCN4BQ8IWT1 228 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 EFCAB13Q8IY85 973 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 TMEM86AQ8N2M4 240 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 SPEM1Q8N4L4 309 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 MAB21L3Q8N8X9 362 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 SUMF1Q8NBK3 374 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 ZBTB44Q8NCP5 570 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 LRRC3Q9BY71 257 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 SMG9Q9H0W8 520 aaKnown RBP13.17□□□□□ -0.3
TRAF4-202ENST00000262396 EPC1Q9H2F5 836 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 IKZF4Q9H2S9 585 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 RBM12Q9NTZ6 932 aaKnown RBP13.17□□□□□ -0.3
TRAF4-202ENST00000262396 GTSE1Q9NYZ3 720 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 UXTQ9UBK9 157 aaPredicted RBP13.17□□□□□ -0.3
TRAF4-202ENST00000262396 ITGA11Q9UKX5 1188 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 SNX9Q9Y5X1 595 aa13.17□□□□□ -0.3
TRAF4-202ENST00000262396 CFAP54Q96N23 3096 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 COL4A3Q01955 1670 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 ZNF233A6NK53 670 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 PRR5-ARHGAP8B1AHC4 643 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 KIAA0391O15091 583 aaKnown RBP13.16□□□□□ -0.3
TRAF4-202ENST00000262396 PRPF6O94906 941 aaKnown RBP13.16□□□□□ -0.3
TRAF4-202ENST00000262396 CHRNB1P11230 501 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 ATF6P18850 670 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 PCSK1P29120 753 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 ADSSP30520 456 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 CTHP32929 405 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 LHX1P48742 406 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 ASIC1P78348 528 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 ARHGAP8P85298 464 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 SATB1Q01826 763 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 KCNA1Q09470 495 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 GRSF1Q12849 480 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRAF4-202ENST00000262396 SLC39A14Q15043 492 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 SURF1Q15526 300 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 ADGRF2Q8IZF7 708 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 CMTM8Q8IZV2 173 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 GPD1LQ8N335 351 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 PDCL2Q8N4E4 241 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 LRRC52Q8N7C0 313 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 FSIP1Q8NA03 581 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 RSPRY1Q96DX4 576 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 USP28Q96RU2 1077 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 MMS19Q96T76 1030 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 OLFML3Q9NRN5 406 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 GKN1Q9NS71 199 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 NOTCH4Q99466 2003 aa13.16□□□□□ -0.3
TRAF4-202ENST00000262396 MYBPHLA2RUH7 354 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms