RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 HMGCRP04035 888 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 MAPK9P45984 424 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 RAP1GDS1P52306 607 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 LAMTOR4Q0VGL1 99 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 MDH1BQ5I0G3 518 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 CCDC138Q96M89 665 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 RSAD1Q9HA92 442 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 CPSF2Q9P2I0 782 aaKnown RBP14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 LRRIQ3A6PVS8 624 aaPredicted RBP14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 E2F6O75461 281 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 F9P00740 461 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 INSRRP14616 1297 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 ACO1P21399 889 aaKnown RBP14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 PDCD2Q16342 344 aaPredicted RBP14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 TTLL9Q3SXZ7 439 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 TSGA10IPQ3SY00 556 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 Q4G0T1 1027 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 ZC2HC1CQ53FD0 456 aaPredicted RBP14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 COPS7BQ9H9Q2 264 aaPredicted RBP14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 UTP6Q9NYH9 597 aaKnown RBP14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 PSD3Q9NYI0 1048 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 ITGA11Q9UKX5 1188 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 GLTPD2A6NH11 291 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 ZKSCAN8Q15776 578 aaPredicted RBP14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 AARS2Q5JTZ9 985 aaKnown RBP14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 OVOS1Q6IE37 1185 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 NR1H4Q96RI1 486 aaPredicted RBP14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 NRBP1Q9UHY1 535 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 M0QYT0 321 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 SLC9A3R1O14745 358 aaPredicted RBP14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 OPHN1O60890 802 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 MCF2P10911 925 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 PRKAR2AP13861 404 aaKnown RBP14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 TUFMP49411 452 aaKnown RBP14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 RHOAP61586 193 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 BEX3Q00994 111 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 EXOSC10Q01780 885 aaKnown RBP14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 TRAPPC11Q7Z392 1133 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 SYTL5Q8TDW5 730 aaPredicted RBP14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 OSCP1Q8WVF1 389 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 TINF2Q9BSI4 451 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 CHCHD3Q9NX63 227 aaKnown RBP14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 FBXO10Q9UK96 956 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 DISP2A7MBM2 1401 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 TRIM66O15016 1216 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 STX7O15400 261 aaKnown RBP14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 ANXA9O76027 345 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 PTK6Q13882 451 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 EFTUD2Q15029 972 aaKnown RBP eCLIP14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 SPDYAQ5MJ70 313 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 DACT2Q5SW24 774 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 LINC00523Q86TU6 105 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 CATSPER3Q86XQ3 398 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 REPS2Q8NFH8 660 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 IPMKQ8NFU5 416 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 UBE2Q2Q8WVN8 375 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 DEFB118Q96PH6 123 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 BPIFA3Q9BQP9 254 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 DDIT4Q9NX09 232 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 ZFATQ9P243 1243 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 GRID2IPA4D2P6 1211 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 VDRP11473 427 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 TYK2P29597 1187 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 SPARCL1Q14515 664 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 CCDC144BQ3MJ40 725 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 DHX40Q8IX18 779 aaKnown RBP14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 SLAIN1Q8ND83 568 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 CAPNS2Q96L46 248 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 KIDINS220Q9ULH0 1771 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 SUPT3HB4E1H0 165 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 SREBF1P36956 1147 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 ADCYAP1R1P41586 468 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 RENBPP51606 427 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 GEMP55040 296 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 MAP3K7CLP57077 242 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 MORF4L2Q15014 288 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 GJC2Q5T442 439 aaPredicted RBP14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 RIOX2Q8IUF8 465 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 ZBED8Q8IZ13 594 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 ARHGEF26Q96DR7 871 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 CCDC3Q9BQI4 270 aa14.19□□□□□ -0.14
PDGFRB-201ENST00000261799 FAM205AQ6ZU69 1335 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 BRD2P25440 801 aaKnown RBP14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 ARSEP51690 589 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 BCAT1P54687 386 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 SESN2P58004 480 aaPredicted RBP14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 C4orf22Q6V702 233 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 GPR142Q7Z601 462 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 CDR2LQ86X02 465 aaPredicted RBP14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 C7orf61Q8IZ16 206 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 SLC28A3Q9HAS3 691 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 SPG21Q9NZD8 308 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 BCL9O00512 1426 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 CNTNAP2Q9UHC6 1331 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 PTPRAP18433 802 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 SYDE1Q6ZW31 735 aaPredicted RBP14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 LRRC43Q8N309 656 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 HES6Q96HZ4 224 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 TRIM9Q9C026 710 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms