RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 TBC1D3IA0A087WXS9 549 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 TBC1D3EA0A087X179 549 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 TBC1D3KA0A087X1G2 549 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 TBC1D3FA6NER0 549 aaPredicted RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 TBC1D3LB9A6J9 549 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 RBAK-RBAKDNI3L0D1 243 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 OR6A2O95222 327 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 KRT16P08779 473 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 TBC1D3HP0C7X1 549 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 MLNP12872 115 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 TPH1P17752 444 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 VASPP50552 380 aaPredicted RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 DGKEP52429 567 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 PSMC1P62191 440 aaKnown RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 MDM2Q00987 491 aaPredicted RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 SULT2A1Q06520 285 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 CYP24A1Q07973 514 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 EOGTQ5NDL2 527 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 C6orf118Q5T5N4 469 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 TSHZ3Q63HK5 1081 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 TBC1D3GQ6DHY5 549 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 GRAMD4Q6IC98 578 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 TBC1D3CQ6IPX1 549 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 PAOXQ6QHF9 649 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 LCA5Q86VQ0 697 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 TBC1D3Q8IZP1 549 aaPredicted RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 TMX3Q96JJ7 454 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 PHF20Q9BVI0 1012 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 UPF3AQ9H1J1 476 aaKnown RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 FOXP1Q9H334 677 aaPredicted RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 IARS2Q9NSE4 1012 aaKnown RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 MRGBPQ9NV56 204 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 NSMCE4AQ9NXX6 385 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 KLF15Q9UIH9 416 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 RIC1Q4ADV7 1423 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 MAP3K4Q9Y6R4 1608 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 GPR75-ASB3A0A0A6YYF3 556 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 ADM5C9JUS6 153 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 MAPK13O15264 365 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 PRPF3O43395 683 aaKnown RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 SRGAP2O75044 1071 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 FESP07332 822 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 KCNA2P16389 499 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 NPTX2P47972 431 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 GLUD2P49448 558 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 ZNF131P52739 623 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 SKOR1P84550 965 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 GFPT1Q06210 699 aaPredicted RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 DMTNQ08495 405 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 EMC2Q15006 297 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 ZNHIT3Q15649 155 aaPredicted RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 QRICH1Q2TAL8 776 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 DGKKQ5KSL6 1271 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 OVOS1Q6IE37 1185 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 ZNF746Q6NUN9 644 aaPredicted RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 CCDC121Q6ZUS5 278 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 VSIG1Q86XK7 387 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 GUF1Q8N442 669 aaKnown RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 DEPDC1BQ8WUY9 529 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 TM9SF4Q92544 642 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 EXT2Q93063 718 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 TMA16Q96EY4 203 aaKnown RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 DYNLL2Q96FJ2 89 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 RIT2Q99578 217 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 MOV10L1Q9BXT6 1211 aaKnown RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 TMEM39BQ9GZU3 492 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 UBE2TQ9NPD8 197 aaPredicted RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 ANKEF1Q9NU02 776 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.22□□□□□ -1.734e-6■□□□□ 11.3
RNF38-201ENST00000259605 RABGEF1Q9UJ41 708 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 ASB3Q9Y575 518 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 C1orf167Q5SNV9 1468 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 POLRMTO00411 1230 aaKnown RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 ITGAVP06756 1048 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 CSF1RP07333 972 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 MSH3P20585 1137 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 CHMLP26374 656 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 MZF1P28698 734 aaPredicted RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 TCF7P36402 384 aaPredicted RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 MSH2P43246 934 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 RCAN1P53805 252 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 CDH8P55286 799 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 SELENOVP59797 346 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 ABCE1P61221 599 aaKnown RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 YWHAZP63104 245 aaKnown RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 TMEM62Q0P6H9 643 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 TRIM28Q13263 835 aaKnown RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 PDAP1Q13442 181 aaKnown RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 P3H1Q32P28 736 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 PLPP4Q5VZY2 271 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 APOA5Q6Q788 366 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 SCIMPQ6UWF3 145 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 PACS1Q6VY07 963 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 GAS2L3Q86XJ1 694 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 LIX1Q8N485 282 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 GBP7Q8N8V2 638 aaPredicted RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 SNX31Q8N9S9 440 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 TTC29Q8NA56 475 aaPredicted RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 IL17REQ8NFR9 667 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 SLC9A7Q96T83 725 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms