RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 BFSP1Q12934 665 aa20.48■□□□□ 0.87
TM6SF1-201ENST00000258909 VEPH1Q14D04 833 aa20.48■□□□□ 0.87
TM6SF1-201ENST00000258909 TSSK4Q6SA08 328 aa20.48■□□□□ 0.87
TM6SF1-201ENST00000258909 YAF2Q8IY57 180 aa20.48■□□□□ 0.87
TM6SF1-201ENST00000258909 PDCL2Q8N4E4 241 aa20.48■□□□□ 0.87
TM6SF1-201ENST00000258909 STKLD1Q8NE28 680 aa20.48■□□□□ 0.87
TM6SF1-201ENST00000258909 CACTINQ8WUQ7 758 aaKnown RBP20.48■□□□□ 0.87
TM6SF1-201ENST00000258909 SNX21Q969T3 373 aa20.48■□□□□ 0.87
TM6SF1-201ENST00000258909 LRRC3BQ96PB8 259 aa20.48■□□□□ 0.87
TM6SF1-201ENST00000258909 TRIM9Q9C026 710 aa20.48■□□□□ 0.87
TM6SF1-201ENST00000258909 TNMDQ9H2S6 317 aa20.48■□□□□ 0.87
TM6SF1-201ENST00000258909 KBTBD4Q9NVX7 518 aa20.48■□□□□ 0.87
TM6SF1-201ENST00000258909 L1RE1Q9UN81 338 aa20.48■□□□□ 0.87
TM6SF1-201ENST00000258909 MAN2B1O00754 1011 aa20.47■□□□□ 0.87
TM6SF1-201ENST00000258909 HAPLN1P10915 354 aaPredicted RBP20.47■□□□□ 0.87
TM6SF1-201ENST00000258909 ACAT1P24752 427 aaKnown RBP20.47■□□□□ 0.87
TM6SF1-201ENST00000258909 PNPLA4P41247 253 aa20.47■□□□□ 0.87
TM6SF1-201ENST00000258909 TAF12Q16514 161 aa20.47■□□□□ 0.87
TM6SF1-201ENST00000258909 ZC3H14Q6PJT7 736 aaKnown RBP20.47■□□□□ 0.87
TM6SF1-201ENST00000258909 ZNF687Q8N1G0 1237 aa20.47■□□□□ 0.87
TM6SF1-201ENST00000258909 GPD1LQ8N335 351 aa20.47■□□□□ 0.87
TM6SF1-201ENST00000258909 TTC8Q8TAM2 541 aa20.47■□□□□ 0.87
TM6SF1-201ENST00000258909 CXorf38Q8TB03 319 aa20.47■□□□□ 0.87
TM6SF1-201ENST00000258909 SPPL2BQ8TCT7 592 aa20.47■□□□□ 0.87
TM6SF1-201ENST00000258909 FAM3CQ92520 227 aa20.47■□□□□ 0.87
TM6SF1-201ENST00000258909 ZFYVE19Q96K21 471 aa20.47■□□□□ 0.87
TM6SF1-201ENST00000258909 PI4K2AQ9BTU6 479 aa20.47■□□□□ 0.87
TM6SF1-201ENST00000258909 MTMR12Q9C0I1 747 aa20.47■□□□□ 0.87
TM6SF1-201ENST00000258909 IL21Q9HBE4 155 aa20.47■□□□□ 0.87
TM6SF1-201ENST00000258909 TRPV5Q9NQA5 729 aa20.47■□□□□ 0.87
TM6SF1-201ENST00000258909 GPR179Q6PRD1 2367 aa20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 OTOGLQ3ZCN5 2332 aa20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 PTPRJQ12913 1337 aa20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 NUP210Q8TEM1 1887 aaPredicted RBP20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 DMXL1Q9Y485 3027 aa20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 ARNTLO00327 626 aa20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 CUTAO60888 179 aa20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 CCNE1P24864 410 aa20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 CASP1P29466 404 aa20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 HOXD13P35453 343 aa20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 SOX9P48436 509 aa20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 GPR15P49685 360 aa20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 ASIC1P78348 528 aa20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 MTAPQ13126 283 aa20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 ARHGAP15Q53QZ3 475 aa20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 DCP1BQ8IZD4 617 aaKnown RBP20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 SPRYD3Q8NCJ5 442 aa20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 C2orf15Q8WU43 125 aaKnown RBP20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 E2F7Q96AV8 911 aa20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 SMG9Q9H0W8 520 aaKnown RBP20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 SEMA4AQ9H3S1 761 aa20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 SIX4Q9UIU6 781 aa20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 FBXO4Q9UKT5 387 aa20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 PCDHB5Q9Y5E4 795 aa20.46■□□□□ 0.87
TM6SF1-201ENST00000258909 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 SLC38A8A6NNN8 435 aa20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 DPYSL4O14531 572 aa20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 HCRTO43612 131 aa20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 HUS1O60921 280 aa20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 PRAMEF12O95522 483 aa20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 YEATS4O95619 227 aa20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 FGF19O95750 216 aa20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 TMEM191BP0C7N4 346 aa20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 MAGEA9P43362 315 aa20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 RPS9P46781 194 aaKnown RBP20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 TSPY1Q01534 308 aa20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 CCDC142Q17RM4 750 aa20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 SDHAF4Q5VUM1 108 aa20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 CBWD2Q8IUF1 395 aa20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 OR5B17Q8NGF7 314 aa20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 CSGALNACT1Q8TDX6 532 aa20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 LRRC27Q9C0I9 530 aa20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 LMAN1LQ9HAT1 526 aa20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 DDX43Q9NXZ2 648 aaKnown RBP20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 ITGA11Q9UKX5 1188 aa20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 SNX9Q9Y5X1 595 aa20.45■□□□□ 0.86
TM6SF1-201ENST00000258909 DCHS1Q96JQ0 3298 aa20.44■□□□□ 0.86
TM6SF1-201ENST00000258909 CHADO15335 359 aa20.44■□□□□ 0.86
TM6SF1-201ENST00000258909 PRPF40AO75400 957 aaKnown RBP20.44■□□□□ 0.86
TM6SF1-201ENST00000258909 HSP90AA1P07900 732 aaKnown RBP20.44■□□□□ 0.86
TM6SF1-201ENST00000258909 RBP5P82980 135 aa20.44■□□□□ 0.86
TM6SF1-201ENST00000258909 FCHO2Q0JRZ9 810 aa20.44■□□□□ 0.86
TM6SF1-201ENST00000258909 ZNF528Q3MIS6 628 aa20.44■□□□□ 0.86
TM6SF1-201ENST00000258909 STXBP4Q6ZWJ1 553 aa20.44■□□□□ 0.86
TM6SF1-201ENST00000258909 OSTM1Q86WC4 334 aa20.44■□□□□ 0.86
TM6SF1-201ENST00000258909 HSCBQ8IWL3 235 aa20.44■□□□□ 0.86
TM6SF1-201ENST00000258909 LRRC52Q8N7C0 313 aa20.44■□□□□ 0.86
TM6SF1-201ENST00000258909 IQUBQ8NA54 791 aa20.44■□□□□ 0.86
TM6SF1-201ENST00000258909 SLC46A2Q9BY10 475 aa20.44■□□□□ 0.86
TM6SF1-201ENST00000258909 BLZF1Q9H2G9 400 aa20.44■□□□□ 0.86
TM6SF1-201ENST00000258909 CUEDC2Q9H467 287 aa20.44■□□□□ 0.86
TM6SF1-201ENST00000258909 TASP1Q9H6P5 420 aa20.44■□□□□ 0.86
TM6SF1-201ENST00000258909 HSPBP1Q9NZL4 362 aa20.44■□□□□ 0.86
TM6SF1-201ENST00000258909 KIF26AQ9ULI4 1882 aaPredicted RBP20.44■□□□□ 0.86
TM6SF1-201ENST00000258909 POLR2DO15514 142 aaKnown RBP20.43■□□□□ 0.86
TM6SF1-201ENST00000258909 ZSCAN22P10073 491 aaPredicted RBP20.43■□□□□ 0.86
TM6SF1-201ENST00000258909 KPNA1P52294 538 aaPredicted RBP20.43■□□□□ 0.86
TM6SF1-201ENST00000258909 AMPD3Q01432 767 aa20.43■□□□□ 0.86
TM6SF1-201ENST00000258909 SMARCB1Q12824 385 aa20.43■□□□□ 0.86
TM6SF1-201ENST00000258909 PKP1Q13835 747 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms