RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 ITIH5Q86UX2 942 aa17.7■□□□□ 0.42
SORT1-201ENST00000256637 UNKQ9C0B0 810 aaKnown RBP17.7■□□□□ 0.42
SORT1-201ENST00000256637 GPATCH2LQ9NWQ4 482 aa17.7■□□□□ 0.42
SORT1-201ENST00000256637 CXCL8P10145 99 aa17.7■□□□□ 0.42
SORT1-201ENST00000256637 SEC13P55735 322 aa17.7■□□□□ 0.42
SORT1-201ENST00000256637 CCDC15Q0P6D6 951 aa17.7■□□□□ 0.42
SORT1-201ENST00000256637 IFT88Q13099 833 aa17.7■□□□□ 0.42
SORT1-201ENST00000256637 NCAPHQ15003 741 aa17.7■□□□□ 0.42
SORT1-201ENST00000256637 EFTUD2Q15029 972 aaKnown RBP eCLIP17.7■□□□□ 0.427e-13■■■■□ 19.7
SORT1-201ENST00000256637 PDIA6Q15084 440 aa17.7■□□□□ 0.42
SORT1-201ENST00000256637 CHMP1BQ7LBR1 199 aa17.7■□□□□ 0.42
SORT1-201ENST00000256637 NCKAP1Q9Y2A7 1128 aa17.7■□□□□ 0.42
SORT1-201ENST00000256637 CPS1P31327 1500 aa17.7■□□□□ 0.42
SORT1-201ENST00000256637 ZC3H13Q5T200 1668 aaKnown RBP17.7■□□□□ 0.42
SORT1-201ENST00000256637 APOA4P06727 396 aa17.7■□□□□ 0.42
SORT1-201ENST00000256637 EPM2AIP1Q7L775 607 aaPredicted RBP17.7■□□□□ 0.42
SORT1-201ENST00000256637 RNPC3Q96LT9 517 aaKnown RBP17.7■□□□□ 0.42
SORT1-201ENST00000256637 IL1RL2Q9HB29 575 aa17.7■□□□□ 0.42
SORT1-201ENST00000256637 RAB6BQ9NRW1 208 aa17.7■□□□□ 0.42
SORT1-201ENST00000256637 GPR75-ASB3A0A0A6YYF3 556 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 MSH4O15457 936 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 MARK2Q7KZI7 788 aaKnown RBP17.69■□□□□ 0.42
SORT1-201ENST00000256637 DET1Q7L5Y6 550 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 UBE2OQ9C0C9 1292 aaKnown RBP17.69■□□□□ 0.42
SORT1-201ENST00000256637 ABHD10Q9NUJ1 306 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 COL5A2P05997 1499 aaPredicted RBP17.69■□□□□ 0.42
SORT1-201ENST00000256637 MYMKA6NI61 221 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 IRF6O14896 467 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 ZNF263O14978 683 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 LRRC14Q15048 493 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 ALS2CLQ60I27 953 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 MKL2Q9ULH7 1088 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 TBX20Q9UMR3 447 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 PNPLA7Q6ZV29 1317 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 CYP7B1O75881 506 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 RHOBTB1O94844 696 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 ZFXP17010 805 aaPredicted RBP17.69■□□□□ 0.42
SORT1-201ENST00000256637 NT5DC4Q86YG4 428 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 UBP1Q9NZI7 540 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 DISP2A7MBM2 1401 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 RHOCP08134 193 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 AP3M2P53677 418 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 ZNF445P59923 1031 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 ALFQ53S48 1182 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 TRIM42Q8IWZ5 723 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 RHOT1Q8IXI2 618 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 GTF2A1LQ9UNN4 478 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 CCL16O15467 120 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 DENND5BQ6ZUT9 1274 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 RUBCNLQ9H714 662 aa17.69■□□□□ 0.42
SORT1-201ENST00000256637 NCALDP61601 193 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 ST13P5Q8NFI4 369 aaPredicted RBP17.68■□□□□ 0.42
SORT1-201ENST00000256637 GRIN3AQ8TCU5 1115 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 OSBPL3Q9H4L5 887 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 MRPL17Q9NRX2 175 aaKnown RBP17.68■□□□□ 0.42
SORT1-201ENST00000256637 PEX10O60683 326 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 RPSAP08865 295 aaKnown RBP17.68■□□□□ 0.42
SORT1-201ENST00000256637 SLURP2P0DP57 97 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 GPD1P21695 349 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 SLC16A1P53985 500 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 ZNF484Q5JVG2 852 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 PLAAQ9Y263 795 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.68■□□□□ 0.42
SORT1-201ENST00000256637 DTNAQ9Y4J8 743 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 WTIPA6NIX2 430 aaPredicted RBP17.68■□□□□ 0.42
SORT1-201ENST00000256637 CCDC130P13994 396 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 HELQQ8TDG4 1101 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 STK36Q9NRP7 1315 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 MEI4A8MW99 385 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 ALDH5A1P51649 535 aaPredicted RBP17.68■□□□□ 0.42
SORT1-201ENST00000256637 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.68■□□□□ 0.421e-6■□□□□ 9.1
SORT1-201ENST00000256637 CCDC90BQ9GZT6 254 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 IGSF9BQ9UPX0 1349 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 MLH1P40692 756 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 ALDH6A1Q02252 535 aaKnown RBP17.68■□□□□ 0.42
SORT1-201ENST00000256637 NECAB2Q7Z6G3 386 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 TLR8Q9NR97 1041 aaKnown RBP17.68■□□□□ 0.42
SORT1-201ENST00000256637 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.68■□□□□ 0.42
SORT1-201ENST00000256637 ACRP10323 421 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 LRRC8EQ6NSJ5 796 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 TTC13Q8NBP0 860 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 CLIP3Q96DZ5 547 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 CEP19Q96LK0 163 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 BFARQ9NZS9 450 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 TPX2Q9ULW0 747 aaKnown RBP17.68■□□□□ 0.42
SORT1-201ENST00000256637 DIP2CQ9Y2E4 1556 aa17.68■□□□□ 0.42
SORT1-201ENST00000256637 SUN1O94901 812 aa17.67■□□□□ 0.42
SORT1-201ENST00000256637 TRIM16O95361 564 aa17.67■□□□□ 0.42
SORT1-201ENST00000256637 ZFP42Q96MM3 310 aa17.67■□□□□ 0.42
SORT1-201ENST00000256637 PLA2G12BQ9BX93 195 aa17.67■□□□□ 0.42
SORT1-201ENST00000256637 SLC27A5Q9Y2P5 690 aa17.67■□□□□ 0.42
SORT1-201ENST00000256637 PPP2R3BQ9Y5P8 575 aa17.67■□□□□ 0.42
SORT1-201ENST00000256637 SH3BGRLO75368 114 aa17.67■□□□□ 0.42
SORT1-201ENST00000256637 USP10Q14694 798 aaKnown RBP17.67■□□□□ 0.42
SORT1-201ENST00000256637 ZNF280DQ6N043 979 aa17.67■□□□□ 0.42
SORT1-201ENST00000256637 TRMT11Q7Z4G4 463 aaKnown RBP17.67■□□□□ 0.42
SORT1-201ENST00000256637 SLC35G2Q8TBE7 412 aa17.67■□□□□ 0.42
SORT1-201ENST00000256637 CAPNS2Q96L46 248 aa17.67■□□□□ 0.42
SORT1-201ENST00000256637 RTN2O75298 545 aa17.67■□□□□ 0.42
SORT1-201ENST00000256637 KRT72Q14CN4 511 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms