RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 TOR3AQ9H497 397 aa13.98□□□□□ -0.17
COLGALT1-201ENST00000252599 KMT5AQ9NQR1 393 aa13.98□□□□□ -0.17
COLGALT1-201ENST00000252599 CCDC162PA2VCL2 907 aa13.98□□□□□ -0.17
COLGALT1-201ENST00000252599 SH3D21A4FU49 640 aa13.98□□□□□ -0.17
COLGALT1-201ENST00000252599 USP17L3A6NCW0 530 aa13.98□□□□□ -0.17
COLGALT1-201ENST00000252599 USP17L4A6NCW7 530 aa13.98□□□□□ -0.17
COLGALT1-201ENST00000252599 ASNA1O43681 348 aa13.98□□□□□ -0.17
COLGALT1-201ENST00000252599 SYNCRIPO60506 623 aaKnown RBP13.98□□□□□ -0.17
COLGALT1-201ENST00000252599 PPP6R2O75170 966 aa13.98□□□□□ -0.17
COLGALT1-201ENST00000252599 TXKP42681 527 aa13.98□□□□□ -0.17
COLGALT1-201ENST00000252599 MAGEA1P43355 309 aa13.98□□□□□ -0.17
COLGALT1-201ENST00000252599 CPA2P48052 419 aa13.98□□□□□ -0.17
COLGALT1-201ENST00000252599 CACNB3P54284 484 aa13.98□□□□□ -0.17
COLGALT1-201ENST00000252599 GSTO1P78417 241 aa13.98□□□□□ -0.17
COLGALT1-201ENST00000252599 FLOT2Q14254 428 aa13.98□□□□□ -0.17
COLGALT1-201ENST00000252599 USP17L1Q7RTZ2 530 aa13.98□□□□□ -0.17
COLGALT1-201ENST00000252599 CCDC124Q96CT7 223 aaKnown RBP13.98□□□□□ -0.17
COLGALT1-201ENST00000252599 SLC4A9Q96Q91 983 aa13.98□□□□□ -0.17
COLGALT1-201ENST00000252599 RGPD8O14715 1765 aaPredicted RBP13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 J3QRK9 145 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 UNC5CO95185 931 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 IREB2P48200 963 aaKnown RBP13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 MYL6P60660 151 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 TICAM1Q8IUC6 712 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 IQCKQ8N0W5 287 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 PHF21AQ96BD5 680 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 FBXL8Q96CD0 374 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 ARHGEF26Q96DR7 871 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 PRKAG3Q9UGI9 489 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 FRMPD2Q68DX3 1309 aaPredicted RBP13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 GON4LQ3T8J9 2241 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 IFI30P13284 250 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 CD53P19397 219 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 FXR1P51114 621 aaKnown RBP eCLIP13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 EHHADHQ08426 723 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 PLD1Q13393 1074 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 ARHGAP44Q17R89 818 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 MFSD14BQ5SR56 506 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 ZNF618Q5T7W0 954 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 HAPLN3Q96S86 360 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 PPCSQ9HAB8 311 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.97□□□□□ -0.174e-6■■■■□ 21.2
COLGALT1-201ENST00000252599 UVRAGQ9P2Y5 699 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 LRWD1Q9UFC0 647 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 FLT1P17948 1338 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 PALLDQ8WX93 1383 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 RAD51BO15315 384 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 C3P01024 1663 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 ACTN1P12814 892 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 ZNF76P36508 570 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 MAPK10P53779 464 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 EVX2Q03828 476 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 NCAPHQ15003 741 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 TAF1CQ15572 869 aaPredicted RBP13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 LRRC47Q8N1G4 583 aaKnown RBP13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 KRT35Q92764 455 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 CDCA7Q9BWT1 371 aaPredicted RBP13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 FAM207AQ9NSI2 230 aaPredicted RBP13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 SENP1Q9P0U3 644 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 HSFX1Q9UBD0 423 aa13.97□□□□□ -0.17
COLGALT1-201ENST00000252599 DCDC2CA8MYV0 355 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 DNALI1O14645 258 aaPredicted RBP13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 SIN3BO75182 1162 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 HSPA6P17066 643 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 PRCPP42785 496 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 PAK1Q13153 545 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 OASLQ15646 514 aaKnown RBP13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 HP1BP3Q5SSJ5 553 aaPredicted RBP13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 KIAA1958Q8N8K9 716 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 PLEKHO2Q8TD55 490 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 ARHGEF3Q9NR81 526 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 NCAPD2Q15021 1401 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 KCNK3O14649 394 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 HLA-DRAP01903 254 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 HAAOP46952 286 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 MORC3Q14149 939 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 EFTUD2Q15029 972 aaKnown RBP eCLIP13.96□□□□□ -0.172e-7■■■■■ 27.7
COLGALT1-201ENST00000252599 TYW1BQ6NUM6 668 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 USP43Q70EL4 1123 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 SLC25A41Q8N5S1 370 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 LRRC20Q8TCA0 184 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 BORCS5Q969J3 196 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 TRIM55Q9BYV6 548 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 MUC3BQ9H195 1237 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 PKD2L1Q9P0L9 805 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 PCDH10Q9P2E7 1040 aa13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 MAGED1Q9Y5V3 778 aaPredicted RBP13.96□□□□□ -0.17
COLGALT1-201ENST00000252599 I3L4J1 428 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 CCDC22O60826 627 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 ZC3H11AO75152 810 aaKnown RBP eCLIP13.95□□□□□ -0.184e-6■■■□□ 16.9
COLGALT1-201ENST00000252599 PSMG1O95456 288 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 ZNF135P52742 658 aaPredicted RBP13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 RCAN1P53805 252 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 EPHB1P54762 984 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 IRX4P78413 519 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 UBE2UQ5VVX9 321 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 FITM2Q8N6M3 262 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 PEX13Q92968 403 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms