RNA–Protein interactions for RNA: ENST00000252085.3

PCDHGA12-201, Transcript of protocadherin gamma subfamily A, 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA12, Length 4,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12-201ENST00000252085 USP15Q9Y4E8 981 aaPredicted RBP13.31□□□□□ -0.28
PCDHGA12-201ENST00000252085 TMEM150BA6NC51 233 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 KLRC4O43908 158 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 ZNF200P98182 395 aaPredicted RBP13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 DEUP1Q05D60 604 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 CLMNQ96JQ2 1002 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 RRN3P2A6NIE6 340 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 RPS6KA5O75582 802 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 SLURP2P0DP57 97 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 MEA1Q16626 185 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 C1orf146Q5VVC0 180 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 FAM71DQ8N9W8 422 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 MDM1Q8TC05 714 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 GLI1P08151 1106 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 GFAPP14136 432 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 GRIK1P39086 918 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 SLC12A3P55017 1021 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 IL17AQ16552 155 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 DCAF6Q58WW2 860 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 RNF135Q8IUD6 432 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 SPATA2LQ8IUW3 424 aaPredicted RBP13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 FBXO16Q8IX29 292 aaPredicted RBP13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 KIAA2013Q8IYS2 634 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 FBXO25Q8TCJ0 367 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 HAS1Q92839 578 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 ALKBH8Q96BT7 664 aaKnown RBP13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 SEC16BQ96JE7 1060 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 FAM161BQ96MY7 647 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 UPF3AQ9H1J1 476 aaKnown RBP13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 RHBDL2Q9NX52 303 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 SIGLEC1Q9BZZ2 1709 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 FRMPD4Q14CM0 1322 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 DYTNA2CJ06 578 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 PSTPIP1O43586 416 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 KDM1AO60341 852 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 ACADSBP45954 432 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 TGFB2P61812 414 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 MRPS35P82673 323 aaKnown RBP13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 IL1RL1Q01638 556 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 GLRA4Q5JXX5 417 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 NOTUMQ6P988 496 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 MPZL3Q6UWV2 235 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 KDELC2Q7Z4H8 507 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 MKL1Q969V6 931 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 TLR10Q9BXR5 811 aa13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 CACYBPQ9HB71 228 aaKnown RBP13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.3□□□□□ -0.28
PCDHGA12-201ENST00000252085 VWA5AO00534 786 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 GNGT2O14610 69 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 DSG3P32926 999 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 GNL1P36915 607 aaPredicted RBP13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 NSUN2Q08J23 767 aaKnown RBP eCLIP13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 FASTKD1Q53R41 847 aaKnown RBP13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 BOLA3Q53S33 107 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 TATDN2Q93075 761 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 HIC2Q96JB3 615 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 C3orf70A6NLC5 250 aaPredicted RBP13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 DNAJC6O75061 913 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 MAPTP10636 758 aaKnown RBP13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 ITGA4P13612 1032 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 PTGISQ16647 500 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 SV2CQ496J9 727 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 TEX9Q8N6V9 391 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 AGR3Q8TD06 166 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 USP33Q8TEY7 942 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 DACT3Q96B18 629 aaPredicted RBP13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 WWP1Q9H0M0 922 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 PPCSQ9HAB8 311 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 ABCF3Q9NUQ8 709 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 DPP3Q9NY33 737 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 SUN2Q9UH99 717 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 CCDC78A2IDD5 438 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 EEF2KO00418 725 aaKnown RBP13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 WNT7AO00755 349 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 CCDC22O60826 627 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 CAND2O75155 1236 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 FUT2Q10981 343 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 TRIM33Q9UPN9 1127 aa13.29□□□□□ -0.28
PCDHGA12-201ENST00000252085 FAM107AO95990 144 aa13.28□□□□□ -0.28
PCDHGA12-201ENST00000252085 HOXD10P28358 340 aa13.28□□□□□ -0.28
PCDHGA12-201ENST00000252085 ZNF157P51786 506 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA12-201ENST00000252085 MYL6P60660 151 aa13.28□□□□□ -0.28
PCDHGA12-201ENST00000252085 FKBP1AP62942 108 aaKnown RBP13.28□□□□□ -0.28
PCDHGA12-201ENST00000252085 KCNA1Q09470 495 aa13.28□□□□□ -0.28
PCDHGA12-201ENST00000252085 PTK7Q13308 1070 aa13.28□□□□□ -0.28
PCDHGA12-201ENST00000252085 TMTC4Q5T4D3 741 aa13.28□□□□□ -0.28
PCDHGA12-201ENST00000252085 ETAA1Q9NY74 926 aa13.28□□□□□ -0.28
PCDHGA12-201ENST00000252085 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.28□□□□□ -0.28
PCDHGA12-201ENST00000252085 SIK3Q9Y2K2 1263 aa13.28□□□□□ -0.28
PCDHGA12-201ENST00000252085 ATRNO75882 1429 aa13.28□□□□□ -0.28
PCDHGA12-201ENST00000252085 H3BQF6 201 aa13.28□□□□□ -0.28
PCDHGA12-201ENST00000252085 SMAPO00193 183 aa13.28□□□□□ -0.28
PCDHGA12-201ENST00000252085 DDX3XO00571 662 aaKnown RBP eCLIP13.28□□□□□ -0.28
PCDHGA12-201ENST00000252085 NVLO15381 856 aaKnown RBP13.28□□□□□ -0.28
PCDHGA12-201ENST00000252085 MMP14P50281 582 aa13.28□□□□□ -0.28
PCDHGA12-201ENST00000252085 KCNT1Q5JUK3 1230 aa13.28□□□□□ -0.28
PCDHGA12-201ENST00000252085 PPIL6Q8IXY8 311 aa13.28□□□□□ -0.28
PCDHGA12-201ENST00000252085 TSSK1BQ9BXA7 367 aa13.28□□□□□ -0.28
PCDHGA12-201ENST00000252085 CYP4F11Q9HBI6 524 aa13.28□□□□□ -0.28
PCDHGA12-201ENST00000252085 CD248Q9HCU0 757 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms