RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 CBWD5Q5RIA9 395 aa14.73□□□□□ -0.05
VEGFA-201ENST00000230480 FOXR2Q6PJQ5 311 aa14.73□□□□□ -0.05
VEGFA-201ENST00000230480 RBM43Q6ZSC3 357 aaKnown RBP14.73□□□□□ -0.05
VEGFA-201ENST00000230480 USP37Q86T82 979 aa14.73□□□□□ -0.05
VEGFA-201ENST00000230480 TMC8Q8IU68 726 aa14.73□□□□□ -0.05
VEGFA-201ENST00000230480 ZDHHC14Q8IZN3 488 aa14.73□□□□□ -0.05
VEGFA-201ENST00000230480 NELFBQ8WX92 580 aa14.73□□□□□ -0.05
VEGFA-201ENST00000230480 SLC35C1Q96A29 364 aa14.73□□□□□ -0.05
VEGFA-201ENST00000230480 ACBD6Q9BR61 282 aa14.73□□□□□ -0.05
VEGFA-201ENST00000230480 PI4K2AQ9BTU6 479 aa14.73□□□□□ -0.05
VEGFA-201ENST00000230480 RPP25Q9BUL9 199 aaKnown RBP14.73□□□□□ -0.05
VEGFA-201ENST00000230480 OXCT2Q9BYC2 517 aaPredicted RBP14.73□□□□□ -0.05
VEGFA-201ENST00000230480 SMYD3Q9H7B4 428 aa14.73□□□□□ -0.05
VEGFA-201ENST00000230480 ZNF334Q9HCZ1 680 aaPredicted RBP14.73□□□□□ -0.05
VEGFA-201ENST00000230480 AVENQ9NQS1 362 aaPredicted RBP14.73□□□□□ -0.05
VEGFA-201ENST00000230480 DDX43Q9NXZ2 648 aaKnown RBP14.73□□□□□ -0.05
VEGFA-201ENST00000230480 MUTYHQ9UIF7 546 aa14.73□□□□□ -0.05
VEGFA-201ENST00000230480 DSEQ9UL01 958 aa14.73□□□□□ -0.05
VEGFA-201ENST00000230480 USTQ9Y2C2 406 aa14.73□□□□□ -0.05
VEGFA-201ENST00000230480 YIPF1Q9Y548 306 aa14.73□□□□□ -0.05
VEGFA-201ENST00000230480 ZNF318Q5VUA4 2279 aa14.73□□□□□ -0.05
VEGFA-201ENST00000230480 TACC1O75410 805 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 ASGR2P07307 311 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 CPB1P15086 417 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 ASPAP45381 313 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 RAP1GAPP47736 663 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 STX17P56962 302 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 FKBP3Q00688 224 aaKnown RBP14.72□□□□□ -0.05
VEGFA-201ENST00000230480 LRRC63Q05C16 580 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 TWF1Q12792 350 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 GSE1Q14687 1217 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 WDR72Q3MJ13 1102 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 INTS6LQ5JSJ4 861 aaKnown RBP14.72□□□□□ -0.05
VEGFA-201ENST00000230480 PAQR9Q6ZVX9 377 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 INTS8Q75QN2 995 aaKnown RBP14.72□□□□□ -0.05
VEGFA-201ENST00000230480 ADGRF2Q8IZF7 708 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 TMEM86AQ8N2M4 240 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 STKLD1Q8NE28 680 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 WHAMMQ8TF30 809 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 UBE2Q2Q8WVN8 375 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 RSAD2Q8WXG1 361 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 DPEP3Q9H4B8 488 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 IL21Q9HBE4 155 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 LIMD1Q9UGP4 676 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 GTF3C4Q9UKN8 822 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 MAFFQ9ULX9 164 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 FRMD4BQ9Y2L6 1034 aa14.72□□□□□ -0.05
VEGFA-201ENST00000230480 NCANO14594 1321 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 CETN3O15182 167 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 HUS1O60921 280 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 RHOP08100 348 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 FAM163BP0C2L3 166 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 HAPLN1P10915 354 aaPredicted RBP14.71□□□□□ -0.05
VEGFA-201ENST00000230480 HMGA1P17096 107 aaKnown RBP14.71□□□□□ -0.05
VEGFA-201ENST00000230480 RPL13P26373 211 aaKnown RBP14.71□□□□□ -0.05
VEGFA-201ENST00000230480 ATICP31939 592 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 SSTR3P32745 418 aaPredicted RBP14.71□□□□□ -0.05
VEGFA-201ENST00000230480 AP3M2P53677 418 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 CACNA2D1P54289 1103 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 LIN9Q5TKA1 542 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 KLHL10Q6JEL2 608 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 CCDC149Q6ZUS6 474 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 FILIP1Q7Z7B0 1213 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 TMEM150AQ86TG1 271 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 TRIML1Q8N9V2 468 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 LMO3Q8TAP4 145 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 SPATA18Q8TC71 538 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 CCDC34Q96HJ3 373 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 TWNKQ96RR1 684 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 C1QTNF1Q9BXJ1 281 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 EPS15L1Q9UBC2 864 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 HMGXB4Q9UGU5 601 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 DPP7Q9UHL4 492 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 HOOK1Q9UJC3 728 aaKnown RBP14.71□□□□□ -0.05
VEGFA-201ENST00000230480 CTNND2Q9UQB3 1225 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 COQ4Q9Y3A0 265 aa14.71□□□□□ -0.05
VEGFA-201ENST00000230480 ANHXE9PGG2 379 aa14.7□□□□□ -0.06
VEGFA-201ENST00000230480 SLC16A3O15427 465 aaKnown RBP14.7□□□□□ -0.06
VEGFA-201ENST00000230480 PDGFRBP09619 1106 aa14.7□□□□□ -0.06
VEGFA-201ENST00000230480 LAMP2P13473 410 aa14.7□□□□□ -0.06
VEGFA-201ENST00000230480 GJA1P17302 382 aa14.7□□□□□ -0.06
VEGFA-201ENST00000230480 CYP2F1P24903 491 aa14.7□□□□□ -0.06
VEGFA-201ENST00000230480 PSMC1P62191 440 aaKnown RBP14.7□□□□□ -0.06
VEGFA-201ENST00000230480 MYO1EQ12965 1108 aa14.7□□□□□ -0.06
VEGFA-201ENST00000230480 DPCR1Q3MIW9 517 aa14.7□□□□□ -0.06
VEGFA-201ENST00000230480 SDHAF4Q5VUM1 108 aa14.7□□□□□ -0.06
VEGFA-201ENST00000230480 GAREM2Q75VX8 874 aa14.7□□□□□ -0.06
VEGFA-201ENST00000230480 NPAS3Q8IXF0 933 aa14.7□□□□□ -0.06
VEGFA-201ENST00000230480 GPR152Q8TDT2 470 aa14.7□□□□□ -0.06
VEGFA-201ENST00000230480 FGF13Q92913 245 aa14.7□□□□□ -0.06
VEGFA-201ENST00000230480 TATDN2Q93075 761 aa14.7□□□□□ -0.06
VEGFA-201ENST00000230480 ZSWIM3Q96MP5 696 aa14.7□□□□□ -0.06
VEGFA-201ENST00000230480 BCO2Q9BYV7 579 aa14.7□□□□□ -0.06
VEGFA-201ENST00000230480 TMEM8AQ9HCN3 771 aa14.7□□□□□ -0.06
VEGFA-201ENST00000230480 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.7□□□□□ -0.061e-6■■□□□ 14
VEGFA-201ENST00000230480 HSFX1Q9UBD0 423 aa14.7□□□□□ -0.06
VEGFA-201ENST00000230480 NXF1Q9UBU9 619 aaKnown RBP14.7□□□□□ -0.06
VEGFA-201ENST00000230480 COL4A3Q01955 1670 aa14.7□□□□□ -0.06
VEGFA-201ENST00000230480 F5P12259 2224 aa14.7□□□□□ -0.06
VEGFA-201ENST00000230480 PRRG1O14668 218 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms