RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 TRIM6Q9C030 488 aaPredicted RBP18.67■□□□□ 0.58
GCDH-201ENST00000222214 FAM204AQ9H8W3 233 aa18.67■□□□□ 0.58
GCDH-201ENST00000222214 GOLGA6CA6NDK9 693 aa18.66■□□□□ 0.58
GCDH-201ENST00000222214 ECEL1O95672 775 aa18.66■□□□□ 0.58
GCDH-201ENST00000222214 GOLGA6DP0CG33 693 aa18.66■□□□□ 0.58
GCDH-201ENST00000222214 FGFR4P22455 802 aa18.66■□□□□ 0.58
GCDH-201ENST00000222214 DENND1BQ6P3S1 775 aa18.66■□□□□ 0.58
GCDH-201ENST00000222214 TTC27Q6P3X3 843 aa18.66■□□□□ 0.58
GCDH-201ENST00000222214 RCOR2Q8IZ40 523 aa18.66■□□□□ 0.58
GCDH-201ENST00000222214 LRRC52Q8N7C0 313 aa18.66■□□□□ 0.58
GCDH-201ENST00000222214 MCEEQ96PE7 176 aa18.66■□□□□ 0.58
GCDH-201ENST00000222214 GOLGA6AQ9NYA3 693 aa18.66■□□□□ 0.58
GCDH-201ENST00000222214 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.66■□□□□ 0.58
GCDH-201ENST00000222214 TCRBV7S2A1N4TA0A589 114 aa18.66■□□□□ 0.58
GCDH-201ENST00000222214 C17orf102A2RUQ5 167 aa18.66■□□□□ 0.58
GCDH-201ENST00000222214 SIGLEC16A6NMB1 481 aa18.66■□□□□ 0.58
GCDH-201ENST00000222214 COPS2P61201 443 aa18.66■□□□□ 0.58
GCDH-201ENST00000222214 RPL7AP62424 266 aaKnown RBP18.66■□□□□ 0.58
GCDH-201ENST00000222214 TMEM62Q0P6H9 643 aa18.66■□□□□ 0.58
GCDH-201ENST00000222214 ZNF268Q14587 947 aaPredicted RBP18.66■□□□□ 0.58
GCDH-201ENST00000222214 FSCN1Q16658 493 aaKnown RBP18.66■□□□□ 0.58
GCDH-201ENST00000222214 ZNF771Q7L3S4 317 aaPredicted RBP18.66■□□□□ 0.58
GCDH-201ENST00000222214 CCDC50Q8IVM0 306 aa18.66■□□□□ 0.58
GCDH-201ENST00000222214 RIN2Q8WYP3 895 aaPredicted RBP18.66■□□□□ 0.58
GCDH-201ENST00000222214 ELOVL4Q9GZR5 314 aa18.66■□□□□ 0.58
GCDH-201ENST00000222214 NEUROG2Q9H2A3 272 aa18.66■□□□□ 0.58
GCDH-201ENST00000222214 DDX56Q9NY93 547 aaKnown RBP18.66■□□□□ 0.58
GCDH-201ENST00000222214 SNTG2Q9NY99 539 aa18.66■□□□□ 0.58
GCDH-201ENST00000222214 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.66■□□□□ 0.58
GCDH-201ENST00000222214 CNTN3Q9P232 1028 aa18.66■□□□□ 0.58
GCDH-201ENST00000222214 MTRF1LQ9UGC7 380 aaKnown RBP18.66■□□□□ 0.58
GCDH-201ENST00000222214 XPOTO43592 962 aaKnown RBP18.65■□□□□ 0.58
GCDH-201ENST00000222214 ATF7P17544 494 aaPredicted RBP18.65■□□□□ 0.58
GCDH-201ENST00000222214 HOXC8P31273 242 aa18.65■□□□□ 0.58
GCDH-201ENST00000222214 SSR1P43307 286 aaKnown RBP18.65■□□□□ 0.58
GCDH-201ENST00000222214 CRYBB1P53674 252 aaPredicted RBP18.65■□□□□ 0.58
GCDH-201ENST00000222214 TAS2R40P59535 323 aa18.65■□□□□ 0.58
GCDH-201ENST00000222214 SNX17Q15036 470 aa18.65■□□□□ 0.58
GCDH-201ENST00000222214 ZBTB6Q15916 424 aa18.65■□□□□ 0.58
GCDH-201ENST00000222214 PTPN20Q4JDL3 420 aa18.65■□□□□ 0.58
GCDH-201ENST00000222214 RUFY4Q6ZNE9 571 aa18.65■□□□□ 0.58
GCDH-201ENST00000222214 TMC3Q7Z5M5 1100 aa18.65■□□□□ 0.58
GCDH-201ENST00000222214 FAM76AQ8TAV0 307 aa18.65■□□□□ 0.58
GCDH-201ENST00000222214 DNAJB3Q8WWF6 145 aa18.65■□□□□ 0.58
GCDH-201ENST00000222214 PIK3R5Q8WYR1 880 aa18.65■□□□□ 0.58
GCDH-201ENST00000222214 NT5C1AQ9BXI3 368 aa18.65■□□□□ 0.58
GCDH-201ENST00000222214 ZDHHC18Q9NUE0 388 aa18.65■□□□□ 0.58
GCDH-201ENST00000222214 USTQ9Y2C2 406 aa18.65■□□□□ 0.58
GCDH-201ENST00000222214 DUSP11O75319 330 aaKnown RBP18.64■□□□□ 0.58
GCDH-201ENST00000222214 KRT3P12035 628 aa18.64■□□□□ 0.58
GCDH-201ENST00000222214 HSD17B3P37058 310 aa18.64■□□□□ 0.58
GCDH-201ENST00000222214 GABRB2P47870 512 aa18.64■□□□□ 0.58
GCDH-201ENST00000222214 KLF1Q13351 362 aaPredicted RBP18.64■□□□□ 0.58
GCDH-201ENST00000222214 ALKAL1Q6UXT8 129 aa18.64■□□□□ 0.58
GCDH-201ENST00000222214 OSBPL8Q9BZF1 889 aa18.64■□□□□ 0.58
GCDH-201ENST00000222214 TRIM31Q9BZY9 425 aa18.64■□□□□ 0.58
GCDH-201ENST00000222214 SYNCQ9H7C4 482 aa18.64■□□□□ 0.58
GCDH-201ENST00000222214 UBQLN1Q9UMX0 589 aaKnown RBP18.64■□□□□ 0.58
GCDH-201ENST00000222214 GOLGA6L10A6NI86 522 aa18.64■□□□□ 0.57
GCDH-201ENST00000222214 O00370 1275 aa18.64■□□□□ 0.57
GCDH-201ENST00000222214 PPFIA2O75334 1257 aa18.64■□□□□ 0.57
GCDH-201ENST00000222214 MICAL2O94851 1124 aa18.64■□□□□ 0.57
GCDH-201ENST00000222214 GAS8O95995 478 aa18.64■□□□□ 0.57
GCDH-201ENST00000222214 CD4P01730 458 aa18.64■□□□□ 0.57
GCDH-201ENST00000222214 PURAQ00577 322 aaKnown RBP18.64■□□□□ 0.57
GCDH-201ENST00000222214 ACAP1Q15027 740 aa18.64■□□□□ 0.57
GCDH-201ENST00000222214 PPP1R7Q15435 360 aa18.64■□□□□ 0.57
GCDH-201ENST00000222214 CCNG2Q16589 344 aa18.64■□□□□ 0.57
GCDH-201ENST00000222214 TAF2Q6P1X5 1199 aa18.64■□□□□ 0.57
GCDH-201ENST00000222214 POLNQ7Z5Q5 900 aa18.64■□□□□ 0.57
GCDH-201ENST00000222214 C7orf31Q8N865 590 aa18.64■□□□□ 0.57
GCDH-201ENST00000222214 LENG1Q96BZ8 264 aaPredicted RBP18.64■□□□□ 0.57
GCDH-201ENST00000222214 HEXIM2Q96MH2 286 aaKnown RBP18.64■□□□□ 0.57
GCDH-201ENST00000222214 TWNKQ96RR1 684 aa18.64■□□□□ 0.57
GCDH-201ENST00000222214 DNAI2Q9GZS0 605 aa18.64■□□□□ 0.57
GCDH-201ENST00000222214 CDHR5Q9HBB8 845 aa18.64■□□□□ 0.57
GCDH-201ENST00000222214 TREHO43280 583 aa18.63■□□□□ 0.57
GCDH-201ENST00000222214 RALAP11233 206 aa18.63■□□□□ 0.57
GCDH-201ENST00000222214 PTPN7P35236 360 aa18.63■□□□□ 0.57
GCDH-201ENST00000222214 NDST1P52848 882 aa18.63■□□□□ 0.57
GCDH-201ENST00000222214 GYS2P54840 703 aa18.63■□□□□ 0.57
GCDH-201ENST00000222214 PSMC1P62191 440 aaKnown RBP18.63■□□□□ 0.57
GCDH-201ENST00000222214 ZNF252P-AS1Q0IIN9 211 aa18.63■□□□□ 0.57
GCDH-201ENST00000222214 CRHR2Q13324 411 aa18.63■□□□□ 0.57
GCDH-201ENST00000222214 ODF2Q5BJF6 829 aa18.63■□□□□ 0.57
GCDH-201ENST00000222214 ATL2Q8NHH9 583 aa18.63■□□□□ 0.57
GCDH-201ENST00000222214 IPO4Q8TEX9 1081 aaKnown RBP18.63■□□□□ 0.57
GCDH-201ENST00000222214 EIF2AQ9BY44 585 aaKnown RBP18.63■□□□□ 0.57
GCDH-201ENST00000222214 DCLK3Q9C098 648 aa18.63■□□□□ 0.57
GCDH-201ENST00000222214 PLAAQ9Y263 795 aa18.63■□□□□ 0.57
GCDH-201ENST00000222214 SNX24Q9Y343 169 aa18.63■□□□□ 0.57
GCDH-201ENST00000222214 TLL2Q9Y6L7 1015 aa18.63■□□□□ 0.57
GCDH-201ENST00000222214 M0QYV0 167 aa18.62■□□□□ 0.57
GCDH-201ENST00000222214 ECM2O94769 699 aaPredicted RBP18.62■□□□□ 0.57
GCDH-201ENST00000222214 LMNB2Q03252 620 aa18.62■□□□□ 0.57
GCDH-201ENST00000222214 DHX9Q08211 1270 aaKnown RBP18.62■□□□□ 0.57
GCDH-201ENST00000222214 NFX1Q12986 1120 aaKnown RBP18.62■□□□□ 0.57
GCDH-201ENST00000222214 CYP4A22Q5TCH4 519 aa18.62■□□□□ 0.57
GCDH-201ENST00000222214 LCLAT1Q6UWP7 414 aa18.62■□□□□ 0.57
GCDH-201ENST00000222214 GRHL1Q9NZI5 618 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms