RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 ATP2C2O75185 946 aa23.47■■□□□ 1.35
CCDC9-201ENST00000221922 OAS1P00973 400 aaKnown RBP23.47■■□□□ 1.35
CCDC9-201ENST00000221922 ITGA8P53708 1063 aa23.47■■□□□ 1.35
CCDC9-201ENST00000221922 MYL6P60660 151 aa23.47■■□□□ 1.35
CCDC9-201ENST00000221922 KLF1Q13351 362 aaPredicted RBP23.47■■□□□ 1.35
CCDC9-201ENST00000221922 ZNF484Q5JVG2 852 aa23.47■■□□□ 1.35
CCDC9-201ENST00000221922 EFCAB12Q6NXP0 572 aa23.47■■□□□ 1.35
CCDC9-201ENST00000221922 CCDC91Q7Z6B0 441 aa23.47■■□□□ 1.35
CCDC9-201ENST00000221922 MAGEC3Q8TD91 643 aa23.47■■□□□ 1.35
CCDC9-201ENST00000221922 MS4A4AQ96JQ5 239 aa23.47■■□□□ 1.35
CCDC9-201ENST00000221922 TRAIPQ9BWF2 469 aa23.47■■□□□ 1.35
CCDC9-201ENST00000221922 CD248Q9HCU0 757 aa23.47■■□□□ 1.35
CCDC9-201ENST00000221922 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.47■■□□□ 1.359e-9■■■■■ 31.1
CCDC9-201ENST00000221922 ANK1P16157 1881 aa23.46■■□□□ 1.35
CCDC9-201ENST00000221922 C22orf31O95567 290 aa23.46■■□□□ 1.35
CCDC9-201ENST00000221922 TMEM191BP0C7N4 346 aa23.46■■□□□ 1.35
CCDC9-201ENST00000221922 ADORA2AP29274 412 aa23.46■■□□□ 1.35
CCDC9-201ENST00000221922 IFNAR2P48551 515 aa23.46■■□□□ 1.35
CCDC9-201ENST00000221922 YWHAEP62258 255 aaKnown RBP23.46■■□□□ 1.35
CCDC9-201ENST00000221922 SNCBQ16143 134 aa23.46■■□□□ 1.35
CCDC9-201ENST00000221922 VSTM1Q6UX27 236 aa23.46■■□□□ 1.35
CCDC9-201ENST00000221922 ZNF467Q7Z7K2 595 aaPredicted RBP23.46■■□□□ 1.35
CCDC9-201ENST00000221922 MORF4L1Q9UBU8 362 aa23.46■■□□□ 1.35
CCDC9-201ENST00000221922 SNX3O60493 162 aa23.45■■□□□ 1.35
CCDC9-201ENST00000221922 GH1P01241 217 aa23.45■■□□□ 1.35
CCDC9-201ENST00000221922 TNNC2P02585 160 aa23.45■■□□□ 1.35
CCDC9-201ENST00000221922 RALAP11233 206 aa23.45■■□□□ 1.35
CCDC9-201ENST00000221922 ATF2P15336 505 aa23.45■■□□□ 1.35
CCDC9-201ENST00000221922 GTF2A2P52657 109 aa23.45■■□□□ 1.35
CCDC9-201ENST00000221922 CCNG2Q16589 344 aa23.45■■□□□ 1.35
CCDC9-201ENST00000221922 ATF7IP2Q5U623 682 aa23.45■■□□□ 1.35
CCDC9-201ENST00000221922 TRPM8Q7Z2W7 1104 aa23.45■■□□□ 1.35
CCDC9-201ENST00000221922 TMEM35BQ8NCS4 154 aa23.45■■□□□ 1.35
CCDC9-201ENST00000221922 EMID1Q96A84 441 aaPredicted RBP23.45■■□□□ 1.35
CCDC9-201ENST00000221922 NLRP4Q96MN2 994 aa23.45■■□□□ 1.35
CCDC9-201ENST00000221922 CISHQ9NSE2 258 aa23.45■■□□□ 1.35
CCDC9-201ENST00000221922 R3HDM2Q9Y2K5 976 aaKnown RBP23.45■■□□□ 1.35
CCDC9-201ENST00000221922 TMEM120BA0PK00 339 aa23.45■■□□□ 1.34
CCDC9-201ENST00000221922 STRNO43815 780 aa23.45■■□□□ 1.34
CCDC9-201ENST00000221922 MGRN1O60291 552 aa23.45■■□□□ 1.34
CCDC9-201ENST00000221922 LGALS2P05162 132 aa23.45■■□□□ 1.34
CCDC9-201ENST00000221922 GCLCP48506 637 aaPredicted RBP23.45■■□□□ 1.34
CCDC9-201ENST00000221922 TAS2R40P59535 323 aa23.45■■□□□ 1.34
CCDC9-201ENST00000221922 TAP1Q03518 808 aa23.45■■□□□ 1.34
CCDC9-201ENST00000221922 MBTD1Q05BQ5 628 aa23.45■■□□□ 1.34
CCDC9-201ENST00000221922 POU5F1BQ06416 359 aa23.45■■□□□ 1.34
CCDC9-201ENST00000221922 ANKRD36BP1Q96IX9 119 aa23.45■■□□□ 1.34
CCDC9-201ENST00000221922 OSBPL8Q9BZF1 889 aa23.45■■□□□ 1.34
CCDC9-201ENST00000221922 RNPEPQ9H4A4 650 aa23.45■■□□□ 1.34
CCDC9-201ENST00000221922 ANAPC5Q9UJX4 755 aa23.45■■□□□ 1.34
CCDC9-201ENST00000221922 B4GALT4O60513 344 aa23.44■■□□□ 1.34
CCDC9-201ENST00000221922 HOXC6P09630 235 aa23.44■■□□□ 1.34
CCDC9-201ENST00000221922 SSTR3P32745 418 aaPredicted RBP23.44■■□□□ 1.34
CCDC9-201ENST00000221922 CLCN3P51790 818 aa23.44■■□□□ 1.34
CCDC9-201ENST00000221922 GSCP56915 257 aaPredicted RBP23.44■■□□□ 1.34
CCDC9-201ENST00000221922 TFAMQ00059 246 aaKnown RBP23.44■■□□□ 1.34
CCDC9-201ENST00000221922 ZNF699Q32M78 642 aa23.44■■□□□ 1.34
CCDC9-201ENST00000221922 MAMDC4Q6UXC1 1216 aa23.44■■□□□ 1.34
CCDC9-201ENST00000221922 RELL1Q8IUW5 271 aa23.44■■□□□ 1.34
CCDC9-201ENST00000221922 PPTC7Q8NI37 304 aa23.44■■□□□ 1.34
CCDC9-201ENST00000221922 TNFSF13BQ9Y275 285 aa23.44■■□□□ 1.34
CCDC9-201ENST00000221922 USTQ9Y2C2 406 aa23.44■■□□□ 1.34
CCDC9-201ENST00000221922 CEP83Q9Y592 693 aa23.44■■□□□ 1.34
CCDC9-201ENST00000221922 BTBD19C9JJ37 291 aa23.44■■□□□ 1.34
CCDC9-201ENST00000221922 INO80B-WBP1J3KQ70 363 aa23.44■■□□□ 1.34
CCDC9-201ENST00000221922 CD58P19256 250 aa23.44■■□□□ 1.34
CCDC9-201ENST00000221922 ADCY8P40145 1251 aa23.44■■□□□ 1.34
CCDC9-201ENST00000221922 SSR1P43307 286 aaKnown RBP23.44■■□□□ 1.34
CCDC9-201ENST00000221922 KYNUQ16719 465 aa23.44■■□□□ 1.34
CCDC9-201ENST00000221922 ANKRD23Q86SG2 305 aa23.44■■□□□ 1.34
CCDC9-201ENST00000221922 FAM228AQ86W67 206 aa23.44■■□□□ 1.34
CCDC9-201ENST00000221922 BBOF1Q8ND07 529 aa23.44■■□□□ 1.34
CCDC9-201ENST00000221922 RBM41Q96IZ5 413 aaKnown RBP23.44■■□□□ 1.34
CCDC9-201ENST00000221922 INO80BQ9C086 356 aaPredicted RBP23.44■■□□□ 1.34
CCDC9-201ENST00000221922 LGALS13Q9UHV8 139 aa23.44■■□□□ 1.34
CCDC9-201ENST00000221922 PCDHGC3Q9UN70 934 aa23.44■■□□□ 1.34
CCDC9-201ENST00000221922 CCL15-CCL14A0A0B4J2E2 113 aa23.43■■□□□ 1.34
CCDC9-201ENST00000221922 TMEM191CA6NGB0 347 aa23.43■■□□□ 1.34
CCDC9-201ENST00000221922 IL18RAPO95256 599 aa23.43■■□□□ 1.34
CCDC9-201ENST00000221922 GJB1P08034 283 aa23.43■■□□□ 1.34
CCDC9-201ENST00000221922 CCL15Q16663 113 aa23.43■■□□□ 1.34
CCDC9-201ENST00000221922 TMEM132AQ24JP5 1023 aa23.43■■□□□ 1.34
CCDC9-201ENST00000221922 DNAJC24Q6P3W2 148 aa23.43■■□□□ 1.34
CCDC9-201ENST00000221922 RCOR2Q8IZ40 523 aa23.43■■□□□ 1.34
CCDC9-201ENST00000221922 NINJ2Q9NZG7 142 aa23.43■■□□□ 1.34
CCDC9-201ENST00000221922 TPX2Q9ULW0 747 aaKnown RBP23.43■■□□□ 1.34
CCDC9-201ENST00000221922 COL1A2P08123 1366 aa23.43■■□□□ 1.34
CCDC9-201ENST00000221922 EVPLQ92817 2033 aa23.43■■□□□ 1.34
CCDC9-201ENST00000221922 MAGEB2O15479 319 aa23.42■■□□□ 1.34
CCDC9-201ENST00000221922 INSRRP14616 1297 aa23.42■■□□□ 1.34
CCDC9-201ENST00000221922 CREB1P16220 341 aa23.42■■□□□ 1.34
CCDC9-201ENST00000221922 EIF4BP23588 611 aaKnown RBP23.42■■□□□ 1.34
CCDC9-201ENST00000221922 CDH5P33151 784 aaPredicted RBP23.42■■□□□ 1.34
CCDC9-201ENST00000221922 TRIP13Q15645 432 aaPredicted RBP23.42■■□□□ 1.34
CCDC9-201ENST00000221922 FAM187BQ17R55 369 aa23.42■■□□□ 1.34
CCDC9-201ENST00000221922 LRRC38Q5VT99 294 aa23.42■■□□□ 1.34
CCDC9-201ENST00000221922 IFNLR1Q8IU57 520 aaPredicted RBP23.42■■□□□ 1.34
CCDC9-201ENST00000221922 LINC01465Q8N7H1 131 aa23.42■■□□□ 1.34
CCDC9-201ENST00000221922 SCLT1Q96NL6 688 aa23.42■■□□□ 1.34
CCDC9-201ENST00000221922 KATNBL1Q9H079 304 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms