RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 DGKDQ16760 1214 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 PMF1Q6P1K2 205 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 KIAA1324Q6UXG2 1013 aaKnown RBP3.59□□□□□ -1.83
NEB-201ENST00000172853 FAM81AQ8TBF8 368 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 LRRC40Q9H9A6 602 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 HMX1Q9NP08 348 aaPredicted RBP3.59□□□□□ -1.83
NEB-201ENST00000172853 KANSL3Q9P2N6 904 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 RSL24D1Q9UHA3 163 aaKnown RBP3.59□□□□□ -1.83
NEB-201ENST00000172853 KERAO60938 352 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 MFN2O95140 757 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 CYB5AP00167 134 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 IFNGR2P38484 337 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 NLRP12P59046 1061 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 DPH5Q9H2P9 285 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 FAM207AQ9NSI2 230 aaPredicted RBP3.59□□□□□ -1.83
NEB-201ENST00000172853 MBD2Q9UBB5 411 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 SMIM31A0A1B0GVY4 71 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 CDC40O60508 579 aaKnown RBP eCLIP3.59□□□□□ -1.83
NEB-201ENST00000172853 KLHL41O60662 606 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 SPAG7O75391 227 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 CLEC3AO75596 197 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 ALDH2P05091 517 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 FGFR1P11362 822 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 ODC1P11926 461 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 POLR2FP61218 127 aaKnown RBP3.59□□□□□ -1.83
NEB-201ENST00000172853 TMED1Q13445 227 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 HDAC1Q13547 482 aaPredicted RBP3.59□□□□□ -1.83
NEB-201ENST00000172853 SH3BP5LQ7L8J4 393 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 SEPT12Q8IYM1 358 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 ATPAF2Q8N5M1 289 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 WDR36Q8NI36 951 aaKnown RBP3.59□□□□□ -1.83
NEB-201ENST00000172853 MDM1Q8TC05 714 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 CALML6Q8TD86 181 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 SPRTNQ9H040 489 aaPredicted RBP3.59□□□□□ -1.83
NEB-201ENST00000172853 CLEC4MQ9H2X3 399 aaPredicted RBP3.59□□□□□ -1.83
NEB-201ENST00000172853 IMPACTQ9P2X3 320 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 VAV3Q9UKW4 847 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 BLOC1S6Q9UL45 172 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 MYO1CO00159 1063 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 LCP1P13796 627 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 CTSWP56202 376 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 IKBKEQ14164 716 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 KLHL35Q6PF15 583 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 P3H2Q8IVL5 708 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 PEX5LQ8IYB4 626 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 METTL21AQ8WXB1 218 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 HIST1H2AAQ96QV6 131 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 NCAPD3P42695 1498 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 H3BM21 787 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 PSIP1O75475 530 aaKnown RBP3.59□□□□□ -1.84
NEB-201ENST00000172853 ABL2P42684 1182 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 ZBED6P86452 979 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 XKR4Q5GH76 650 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 NAA35Q5VZE5 725 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 ESYT1Q9BSJ8 1104 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 NPHS2Q9NP85 383 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 UBE2TQ9NPD8 197 aaPredicted RBP3.59□□□□□ -1.84
NEB-201ENST00000172853 IGSF9BQ9UPX0 1349 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 CENPXA8MT69 81 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 E9PBE3 544 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 ZNF208O43345 1280 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 EIF2AK2P19525 551 aaKnown RBP3.59□□□□□ -1.84
NEB-201ENST00000172853 KELP23276 732 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 TLX1P31314 330 aaPredicted RBP3.59□□□□□ -1.84
NEB-201ENST00000172853 MLH1P40692 756 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 PRELPP51888 382 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 LONRF3Q496Y0 759 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 ZNF579Q8NAF0 562 aaKnown RBP3.59□□□□□ -1.84
NEB-201ENST00000172853 TMBIM4Q9HC24 238 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 VPS45Q9NRW7 570 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 ADA2Q9NZK5 511 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 PSME2Q9UL46 239 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 FLT4P35916 1363 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 SF3B1O75533 1304 aaKnown RBP eCLIP3.59□□□□□ -1.84
NEB-201ENST00000172853 ADCY3O60266 1144 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 KCNQ4P56696 695 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 GPSM2P81274 684 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.59□□□□□ -1.84
NEB-201ENST00000172853 SPATA31A6Q5VVP1 1343 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 TEX46H3BTG2 121 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 PDE8BO95263 885 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 CSF1RP07333 972 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 ATP5F1P24539 256 aaPredicted RBP3.59□□□□□ -1.84
NEB-201ENST00000172853 PKN2Q16513 984 aaKnown RBP3.59□□□□□ -1.84
NEB-201ENST00000172853 CHPFQ8IZ52 775 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 FANCBQ8NB91 859 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 PBKQ96KB5 322 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 RNF146Q9NTX7 359 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 ERBB3P21860 1342 aa3.59□□□□□ -1.84
NEB-201ENST00000172853 TXNP10599 105 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 SELENOVP59797 346 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 KLHL12Q53G59 568 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 C10orf120Q5SQS8 335 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 CCNYL1Q8N7R7 359 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 GPRC5AQ8NFJ5 357 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 ABTB1Q969K4 478 aaPredicted RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 SLC9A7Q96T83 725 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 SH3GL2Q99962 352 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 CCT8L1PA6NM43 557 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 PLA2G4FQ68DD2 849 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms