RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Txnrd2Q9JLT4 524 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 PurbO35295 324 aaKnown RBP16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Fmr1P35922 614 aaKnown RBP16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Hipk4Q3V016 616 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Slc10a5Q5PT54 434 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Arhgap30Q640N3 1101 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Mrgprb8Q7TN51 330 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Nipa1Q8BHK1 323 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Paip2bQ91W45 136 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 SelenovD3YXG1 328 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Dcdc2bF7BCK0 340 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Il13ra2O88786 383 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Rrm1P07742 792 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Tmem26Q3UP23 366 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Trim16Q99PP9 556 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Kif9Q9WV04 790 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 StrnO55106 780 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Il27raO70394 623 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Mmp14P53690 582 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Faf1P54731 649 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 4930502E18RikQ14BQ3 236 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Ptk6Q64434 451 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 PoliQ6R3M4 717 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Pgrmc2Q80UU9 217 aaKnown RBP16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Olfml3Q8BK62 406 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Nlrp4aQ8BU40 982 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Rpa1Q8VEE4 623 aaKnown RBP16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Def8Q99J78 448 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Grk1Q9WVL4 564 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Slfn14V9GXG1 899 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Col3a1P08121 1464 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Zscan4-ps1A0A1C7CYV3 506 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Zscan4dA7KBS4 506 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Gm20721E9Q2U8 318 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Rmdn3Q3UJU9 470 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Tgfbrap1Q3UR70 860 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Zscan4fQ3URS2 506 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Tfdp2Q64163 446 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Gemin4Q6P6L6 1058 aaKnown RBP16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Zscan4cQ80VJ6 506 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Ccdc92Q8VDN4 314 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Q9D2Q3 444 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Ppil2Q9D787 521 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Ndufa13Q9ERS2 144 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Lrrc14bQ3UJB3 510 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Atg9bQ6EBV9 922 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Dach2Q925Q8 634 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 GOLGA7BQ9D428 167 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Olfr711Q9EPG2 314 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Chrna9G3X8Z7 479 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Rufy4Q3TYX8 563 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Stambpl1Q76N33 436 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 3830417A13RikQ8BQJ2 303 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Gjd4Q8BSD4 364 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Pcyox1Q9CQF9 505 aa16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Chchd3Q9CRB9 227 aaKnown RBP16.25■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Gm10250G3X9L6 160 aaKnown RBP16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Pcsk1P63239 753 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Trim43cP86449 446 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Trip10Q8CJ53 603 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Kct2Q8K201 259 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Ascc2Q91WR3 749 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Prmt7Q922X9 692 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Taf11Q99JX1 211 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Atp5hQ9DCX2 161 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Morf4l2Q9R0Q4 288 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Morc1Q9WVL5 950 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Bpifb9bA2AJD1 591 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Ubxn2bQ0KL01 331 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 IqcmQ149I8 489 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Fam198aQ3UY90 562 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Ccdc185Q3V118 621 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Myl6Q60605 151 aaKnown RBP16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Foxn1Q61575 648 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Olfr670Q7TRP3 312 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Ip6k2Q80V72 448 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Ric8bQ80XE1 520 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Bpifb9aQ80XI7 591 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Usp20Q8C6M1 916 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Adprhl2Q8CG72 370 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Frmd4bQ920B0 1035 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Ccdc22Q9JIG7 627 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Cul3Q9JLV5 768 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Zmynd8A2A484 1235 aaKnown RBP16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Prdm12A2AJ77 365 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Gm5689F6Y2A6 97 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 BhmtO35490 407 aaKnown RBP16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Rcn1Q05186 325 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Grm2Q14BI2 872 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Rrp36Q3UFY0 244 aaKnown RBP16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Satb1Q60611 764 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Slc51aQ8R000 340 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Nudcd3Q8R1N4 363 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Ttc4Q8R3H9 386 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 S1pr4Q9Z0L1 386 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Patl2A2ARM1 529 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Serpinb9O08797 374 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Chil3O35744 398 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Lta4hP24527 611 aa16.24■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Tubgcp3P58854 905 aa16.24■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms