RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Gpsm1Q6IR34 673 aa32.4■■■□□ 2.78
Ctdnep1-201ENSMUST00000108593 Necab1Q8BG18 352 aa32.4■■■□□ 2.78
Ctdnep1-201ENSMUST00000108593 Tmprss4Q8VCA5 435 aa32.4■■■□□ 2.78
Ctdnep1-201ENSMUST00000108593 Pcdhb2Q91Y00 799 aa32.4■■■□□ 2.78
Ctdnep1-201ENSMUST00000108593 CalcbQ99MP3 130 aa32.4■■■□□ 2.78
Ctdnep1-201ENSMUST00000108593 Rpl17Q9CPR4 184 aaKnown RBP32.4■■■□□ 2.78
Ctdnep1-201ENSMUST00000108593 Tspan3Q9QY33 253 aa32.4■■■□□ 2.78
Ctdnep1-201ENSMUST00000108593 Eif2ak3Q9Z2B5 1114 aa32.4■■■□□ 2.78
Ctdnep1-201ENSMUST00000108593 Gm27029A2A4P4 543 aa32.39■■■□□ 2.78
Ctdnep1-201ENSMUST00000108593 Osbpl7A2A716 963 aa32.39■■■□□ 2.78
Ctdnep1-201ENSMUST00000108593 Gm5160F8VPN3 147 aa32.39■■■□□ 2.78
Ctdnep1-201ENSMUST00000108593 Trappc3O55013 180 aa32.39■■■□□ 2.78
Ctdnep1-201ENSMUST00000108593 Gjb3P28231 270 aa32.39■■■□□ 2.78
Ctdnep1-201ENSMUST00000108593 Adcyap1r1P70205 496 aa32.39■■■□□ 2.78
Ctdnep1-201ENSMUST00000108593 Shroom1Q5SX79 823 aa32.39■■■□□ 2.78
Ctdnep1-201ENSMUST00000108593 Ints6lQ8BND4 861 aa32.39■■■□□ 2.78
Ctdnep1-201ENSMUST00000108593 Olfr348Q8VGK3 313 aa32.39■■■□□ 2.78
Ctdnep1-201ENSMUST00000108593 Gtf3c6Q9D8P7 227 aa32.39■■■□□ 2.78
Ctdnep1-201ENSMUST00000108593 Erap1Q9EQH2 930 aa32.39■■■□□ 2.78
Ctdnep1-201ENSMUST00000108593 PtproE9Q612 1226 aa32.38■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 4933406M09RikG3XA12 479 aa32.38■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Enpp1P06802 906 aa32.38■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Psmc1P62192 440 aa32.38■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Lrch2Q3UMG5 773 aa32.38■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Ldhal6bQ8BVP2 382 aa32.38■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Kremen2Q8K1S7 461 aa32.38■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Uhrf1Q8VDF2 782 aaKnown RBP32.38■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Uso1Q9Z1Z0 959 aaKnown RBP32.38■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Zscan4-ps3A0A1B0GRH6 506 aa32.37■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Zscan4-ps2A0A1C7CYU6 506 aa32.37■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Cetn1P41209 172 aa32.37■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Tpm1P58771 284 aa32.37■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Tmem209Q8BRG8 561 aaKnown RBP32.37■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Rhpn2Q8BWR8 686 aa32.37■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Armc9Q9D2I5 817 aa32.37■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Pdzd4Q9QY39 772 aa32.37■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Umodl1Q5DID3 1319 aa32.37■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Zfp408H7BX78 710 aa32.37■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Ppp3ccP48455 513 aa32.37■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Oca2Q62052 833 aa32.37■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 MyorgQ69ZQ1 716 aa32.37■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Nlrp14Q6B966 993 aa32.37■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Tmc8Q7TN58 722 aa32.37■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Sytl5Q80T23 753 aa32.37■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Tc2nQ91XT6 489 aa32.37■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 NamptQ99KQ4 491 aa32.37■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Pus10Q9D3U0 527 aa32.37■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Nup210Q9QY81 1886 aaKnown RBP32.36■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Ap5z1Q3U829 807 aa32.36■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Tatdn1Q6P8M1 295 aa32.36■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Fmnl3Q6ZPF4 1028 aa32.36■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 VillQ91YD6 859 aa32.36■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Tmem132aQ922P8 1018 aa32.36■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Nmnat1Q9EPA7 285 aa32.36■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Timp4Q9JHB3 224 aa32.36■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Rnf14Q9JI90 485 aa32.36■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Ddx21Q9JIK5 851 aaKnown RBP32.36■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 CitP49025 2055 aa32.35■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Gm6657A0A1B0GRJ3 277 aa32.35■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Psmc3O88685 442 aa32.35■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Gdf7P43029 461 aa32.35■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Arpp19P56212 112 aaKnown RBP32.35■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Ppp4r3cQ3V0Y1 813 aa32.35■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Mapre1Q61166 268 aaKnown RBP32.35■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Pde1cQ64338 706 aa32.35■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Susd6Q8BGE4 302 aa32.35■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Gfpt2Q9Z2Z9 682 aa32.35■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Zfp651E9PZ11 729 aa32.34■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Wnt6P22727 364 aa32.34■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Ctnnd1P30999 938 aaKnown RBP32.34■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Casd1Q7TN73 797 aa32.34■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Pcsk9Q80W65 694 aa32.34■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Rxfp2Q91ZZ5 737 aa32.34■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Uchl4P58321 233 aa32.33■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 RbfaQ6P3B9 350 aa32.33■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Trim68Q8K243 485 aa32.33■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Smarcb1Q9Z0H3 385 aa32.33■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 P01652 108 aa32.33■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Ca3P16015 260 aa32.33■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 IhhP97812 411 aa32.33■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Aarsd1Q3THG9 412 aa32.33■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Ptpn14Q62130 1189 aa32.33■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 Adam22Q9R1V6 904 aa32.33■■■□□ 2.77
Ctdnep1-201ENSMUST00000108593 PkmP52480 531 aaKnown RBP32.32■■■□□ 2.76
Ctdnep1-201ENSMUST00000108593 Ppp1r12cQ3UMT1 782 aa32.32■■■□□ 2.76
Ctdnep1-201ENSMUST00000108593 Cyfip2Q5SQX6 1253 aa32.32■■■□□ 2.76
Ctdnep1-201ENSMUST00000108593 Sh3d19Q91X43 789 aa32.32■■■□□ 2.76
Ctdnep1-201ENSMUST00000108593 Mfap3lQ9D3X9 409 aa32.32■■■□□ 2.76
Ctdnep1-201ENSMUST00000108593 Iigp1Q9QZ85 413 aa32.32■■■□□ 2.76
Ctdnep1-201ENSMUST00000108593 Myo7aP97479 2215 aa32.32■■■□□ 2.76
Ctdnep1-201ENSMUST00000108593 Arhgef10Q8C033 1345 aa32.31■■■□□ 2.76
Ctdnep1-201ENSMUST00000108593 Gm3642K7N6V4 267 aa32.31■■■□□ 2.76
Ctdnep1-201ENSMUST00000108593 Odc1P00860 461 aa32.31■■■□□ 2.76
Ctdnep1-201ENSMUST00000108593 Myl1P05977 188 aa32.31■■■□□ 2.76
Ctdnep1-201ENSMUST00000108593 Prrt3Q6PE13 971 aa32.31■■■□□ 2.76
Ctdnep1-201ENSMUST00000108593 Arhgap26Q6ZQ82 814 aa32.31■■■□□ 2.76
Ctdnep1-201ENSMUST00000108593 Depdc1bQ8BH88 529 aa32.31■■■□□ 2.76
Ctdnep1-201ENSMUST00000108593 Tbc1d19Q8VDV7 526 aa32.31■■■□□ 2.76
Ctdnep1-201ENSMUST00000108593 Fam49bQ921M7 324 aa32.31■■■□□ 2.76
Ctdnep1-201ENSMUST00000108593 Tpgs1Q99MS8 303 aa32.31■■■□□ 2.76
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms