RNA–Protein interactions for RNA: ENSMUST00000062606.7

Upk3b-201, Transcript of Uroplakin-3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3b, Length 3,530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3b-201ENSMUST00000062606 RxrgP28705 463 aa12.66□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Map3k7clP58500 142 aa12.66□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Sec31aQ3UPL0 1230 aaKnown RBP12.66□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Mthfd1lQ3V3R1 977 aaKnown RBP12.66□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Icam5Q60625 917 aa12.66□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Cracr2bQ80ZJ8 394 aa12.66□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Atg4cQ811C2 458 aa12.66□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Tdp1Q8BJ37 609 aa12.66□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Mtmr14Q8VEL2 648 aa12.66□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Mettl13Q91YR5 698 aa12.66□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Ptdss1Q99LH2 473 aaKnown RBP12.66□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Tex19.1Q99MV2 351 aa12.66□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Cfap57Q9D180 1249 aa12.66□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Sertad1Q9JL10 236 aa12.66□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Gm12248A0A1W2P8B8 313 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Gm12666A2AMD0 254 aaKnown RBP12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Trappc11B2RXC1 1133 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Gm5934D3Z4U6 212 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Gjb1P28230 283 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Adcy8P97490 1249 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Wdr70Q3TWF6 657 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Carmil2Q3V3V9 1296 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Arhgap30Q640N3 1101 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 H6pdQ8CFX1 789 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Trpm8Q8R4D5 1104 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Pramef12Q9D2F1 463 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Sh2d4aQ9D7V1 421 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Slc34a2Q9DBP0 697 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Yipf5Q9EQQ2 257 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Clec4aQ9QZ15 238 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Extl3Q9WVL6 918 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Pex11aQ9Z211 246 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Myo5aQ99104 1853 aaKnown RBP12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 CN725425A0A087WRU1 652 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Gm44511A0A0N4SW10 223 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Gm340F6RGI3 1242 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Stra6O70491 670 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 GfapP03995 430 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Klrb1bP27812 223 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Ptpn11P35235 597 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Irs1P35569 1233 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 IvlP48997 467 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Ddx4Q61496 702 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Atp4aQ64436 1033 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Klhl29Q80T74 875 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Ttc29Q80VM3 471 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Tspan9Q8BJU2 239 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Osbpl6Q8BXR9 959 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Tmem192Q9CXT7 266 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Pgm3Q9CYR6 542 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Rnf4Q9QZS2 194 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Gpc6Q9R087 555 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Slc7a5Q9Z127 512 aa12.65□□□□□ -0.38
Upk3b-201ENSMUST00000062606 1600015I10RikE9Q745 711 aa12.65□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Cdh16O88338 830 aa12.65□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Chrnb1P09690 501 aa12.65□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Cct7P80313 544 aa12.65□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Dph1Q5NCQ5 438 aa12.65□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Nlrp14Q6B966 993 aa12.65□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Znf76Q8BMU0 568 aa12.65□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Zdhhc14Q8BQQ1 489 aa12.65□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Yars2Q8BYL4 472 aaKnown RBP12.65□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Apol7cQ8C6E1 369 aa12.65□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Phtf2Q8CB19 747 aa12.65□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Zswim3Q8CFL8 695 aa12.65□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Gpc3Q8CFZ4 579 aa12.65□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Rassf9Q8K342 435 aa12.65□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Ttc8Q8VD72 515 aa12.65□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Dgcr8Q9EQM6 773 aa12.65□□□□□ -0.39
Upk3b-201ENSMUST00000062606 PalmdQ9JHU2 551 aa12.65□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Ggps1Q9WTN0 300 aa12.65□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Trip11E9Q512 1976 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Mllt3A2AM29 569 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Ddx23D3Z0M9 819 aaKnown RBP12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Nccrp1G3X9C2 266 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Krt8P11679 490 aaKnown RBP12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Kcnj12P52187 427 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Pcif1P59114 706 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Nsun6Q7TS68 476 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Klhl7Q8BUL5 586 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Celf3Q8CIN6 465 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Lgi2Q8K4Z0 550 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 ZwilchQ8R060 589 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Xpo5Q924C1 1204 aaKnown RBP12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Xpo6Q924Z6 1125 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Bpifa3Q9D9J8 232 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Fmnl1Q9JL26 1094 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 RptorQ8K4Q0 1335 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Gm6133B2RY53 190 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 March10E9PX79 788 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Pip4k2aO70172 405 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 AgtP11859 477 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Ugt1a2P70691 533 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 HnrnpdQ60668 355 aaKnown RBP12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Zfp90Q61967 636 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Ddr2Q62371 854 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Q6PD19 689 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Prl3a1Q78Y73 227 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Cep95Q8BVV7 827 aa12.64□□□□□ -0.39
Upk3b-201ENSMUST00000062606 Klhl20Q8VCK5 604 aa12.64□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms