RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Prpf39Q8K2Z2 665 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Smyd2Q8R5A0 433 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Trim59Q922Y2 403 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Cap2Q9CYT6 476 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 F830016B08RikG3UWE2 416 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Ccng2O08918 344 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Tsc22d1P62500 1077 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Suz12Q80U70 741 aaKnown RBP17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Pramel6Q810Y9 485 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Lsm7Q9CQQ8 103 aaKnown RBP17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Bbs2Q9CWF6 721 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 IcoslgQ9JHJ8 322 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Atp6v1b2P62814 511 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Cep95Q8BVV7 827 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Cdhr2E9Q7P9 1308 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Odc1P00860 461 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Slc11a2P49282 568 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 IgfalsP70389 603 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Krt76Q3UV17 594 aaKnown RBP17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Tmem270Q6UJB9 264 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Tbc1d10bQ8BHL3 798 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Rmnd5bQ91YQ7 393 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Cmtr1Q9DBC3 837 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Casc4Q6P2L7 435 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Chchd3Q9CRB9 227 aaKnown RBP17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Gcnt4E9Q649 455 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 P01734 135 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Adam2Q60718 735 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Tlr11Q6R5P0 926 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Gramd1aQ8VEF1 722 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Ifi30Q9ESY9 248 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Tatdn3Q3U1C6 294 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Pla2g4dQ50L43 825 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Stau1Q9Z108 487 aaKnown RBP17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Spef2Q8C9J3 1734 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Zbtb11G5E8B9 1050 aaKnown RBP17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Znf746Q3U133 652 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Sco1Q5SUC9 284 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Coq8aQ60936 645 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Znf579Q80VM4 562 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Clca2Q8BG22 942 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Rbck1Q9WUB0 508 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Tbx1P70323 479 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Wdr12Q9JJA4 423 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 A930018M24RikB7ZMY3 218 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 PolgP54099 1218 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Ttc7aQ8BGB2 858 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Snrnp27Q8K194 155 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 BrafP28028 804 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Scfd2Q8BTY8 684 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Gcnt1Q09324 428 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Shcbp1lQ3TTP0 639 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Q8K2W9 541 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Eif3lQ8QZY1 564 aaKnown RBP17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Slf1Q8R3P9 1054 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Q9CYI0 393 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Terb2Q9D494 218 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Nfu1Q9QZ23 255 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 SynrgQ5SV85 1306 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 CidebO70303 219 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Snap25P60879 206 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 MlxipQ2VPU4 917 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Zc3h15Q3TIV5 426 aaKnown RBP17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Hist2h2acQ64523 129 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Hist2h2aa1Q6GSS7 130 aaKnown RBP17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Gja10Q9WUS4 505 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Baz2bA2AUY4 2123 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 4930407I10RikD3Z5T8 1512 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 ThraP63058 492 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Garnl3Q3V0G7 1038 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 PolrmtQ8BKF1 1207 aaKnown RBP17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Mta1Q8K4B0 715 aaKnown RBP17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Alg1Q921Q3 482 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 TpbpbQ9CQC0 121 aa17.24■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Ccnd1P25322 295 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 SarsP26638 512 aaKnown RBP17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Magee1Q6PCZ4 918 aaKnown RBP17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Usp6nlQ80XC3 819 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Zfp454Q80Y34 536 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Zbtb1Q91VL9 713 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Hk2O08528 917 aaKnown RBP17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 McuQ3UMR5 350 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Cdk17Q8K0D0 523 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Golph3lQ8R088 285 aaKnown RBP17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Nudt12Q9DCN1 462 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Lonrf1D3YY23 762 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Sec22bO08547 215 aaKnown RBP17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Arhgap45Q3TBD2 1116 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 CrkQ64010 304 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Zmym6Q8BS54 1249 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Ccdc59Q8R2N0 240 aaKnown RBP17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Cyp3a44Q9EQW4 504 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Ddx21Q9JIK5 851 aaKnown RBP17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Ccnt2Q7TQK0 723 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Eme1Q8BJW7 570 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 CtsfQ9R013 462 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Fam205aA2APU8 1308 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Vmn2r38G3UYA8 861 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Vmn2r33K7N705 861 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Vmn2r44L7N2E1 861 aa17.23■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms