RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 AfdnQ9QZQ1 1820 aaKnown RBP11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Gm4841E9QAA8 417 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Per2O54943 1257 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 AmhP27106 555 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Rab17P35292 214 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ampd1Q3V1D3 745 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Lamc2Q61092 1191 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Gga1Q8R0H9 635 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Otud7aQ8R554 926 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Psip1Q99JF8 528 aaKnown RBP11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Atp11cQ9QZW0 1129 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Znfx1Q8R151 1909 aaKnown RBP11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Spata31d1dE9Q5W2 1247 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ccnd1P25322 295 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 PtpreP49446 699 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Styk1Q6J9G1 429 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Rhpn2Q8BWR8 686 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ago2Q8CJG0 860 aaKnown RBP11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ank1Q02357 1862 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Kcng1A2BDX4 514 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Unc13dB2RUP2 1085 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Cyp2t4E9PWV0 503 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Hoxa11P31311 313 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 HdxQ14B70 692 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Srrm1Q52KI8 946 aaKnown RBP11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Znf354cQ571J5 560 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Camta2Q80Y50 1208 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Vmn2r43Q80Z08 845 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Svs3bQ8BZH8 265 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Prpf31Q8CCF0 499 aaKnown RBP11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Polr2bQ8CFI7 1174 aaKnown RBP11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Psmd6Q99JI4 389 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Nup50Q9JIH2 466 aaKnown RBP11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Arhgef37A1IGU4 676 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Cxcr2P35343 359 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Psmc5P62196 406 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Stx3Q64704 289 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Fam20aQ8CID3 541 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Prdm12A2AJ77 365 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Abcb5B5X0E4 1255 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Dync1i2O88487 612 aaKnown RBP11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Prkg1P0C605 671 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Mphosph8Q3TYA6 858 aaKnown RBP11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 SpdyaQ5IBH7 310 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Pik3r5Q5SW28 871 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Zdhhc18Q5Y5T2 380 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Hif1aQ61221 836 aaKnown RBP11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 FsbpQ8BKE5 299 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Gpc5Q8CAL5 572 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Stoml1Q8CI66 399 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Q9CPS8 106 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Pdk2Q9JK42 407 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Bub1bQ9Z1S0 1052 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Myh3P13541 1940 aa11.85□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Rtn2O70622 471 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Epb41l4aP52963 686 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 CstaP56567 97 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Rad54lP70270 747 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Tcf4Q60722 670 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Als2clQ60I26 952 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Nlrp4eQ66X19 978 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ccdc117Q6PB51 277 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ush1gQ80T11 461 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Q80WR5 230 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Atp5c1Q91VR2 298 aaKnown RBP11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Prmt2Q9R144 448 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Gabbr1Q9WV18 960 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Gm29554A0A087WNW4 188 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Gm20509G3UZF1 325 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Lrrc23O35125 340 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 PkmP52480 531 aaKnown RBP11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 NfibP97863 570 aaKnown RBP11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ugt3a1Q3UP75 523 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ppp4r3cQ3V0Y1 813 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Zfp341Q6PGC9 846 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Sulf1Q8K007 870 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Sumf1Q8R0F3 372 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 MrgbpQ9DAT2 204 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Il13ra2O88786 383 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Slc17a7Q3TXX4 560 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Pdp2Q504M2 532 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Kdm1bQ8CIG3 826 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 OlahQ8R197 265 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Hars2Q99KK9 505 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Fam227aQ9D3V8 625 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Tmod2Q9JKK7 351 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Rps6ka2Q9WUT3 733 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Maml3D4QGC2 1135 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Vmn2r104E9Q2J5 860 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Znf112Q0VAW7 879 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 AlcamQ61490 583 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Glra2Q7TNC8 452 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 SpidrQ8BGX7 933 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Tmem74Q8BQU7 305 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Adgra1Q8C4G9 578 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Vmn1r213Q8R278 384 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Abcb11Q9QY30 1321 aa11.84□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Slc10a3P21129 473 aa11.83□□□□□ -0.51
Topbp1-201ENSMUST00000035164 RarbP22605 482 aa11.83□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ezh1P70351 747 aa11.83□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms