RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Cox18Q8VC74 331 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Magea2Q9R2A2 320 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Apba3O88888 571 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Lsp1P19973 330 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Sstr3P30935 428 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Ppme1Q8BVQ5 386 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Pgm5Q8BZF8 567 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Trim12aQ99PQ1 284 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Spag6Q9JLI7 507 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Fcer2P20693 331 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 ProcP33587 460 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Faf1P54731 649 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Tdpoz3Q717B4 365 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Elac2Q80Y81 831 aaKnown RBP17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Q8C1R3 189 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Ccdc137Q8R0K4 290 aaKnown RBP17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Def8Q99J78 448 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Vta1Q9CR26 309 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Fgf15O35622 218 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Usp4P35123 962 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Adad1Q5SUE7 619 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Fbxl5Q8C2S5 690 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Dusp19Q8K4T5 220 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Snapc2Q91XA5 359 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Aipl1Q924K1 328 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Iqcj-Schip1A0A088MLT8 559 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Wdr49A0A0N4SUK7 710 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Schip1P0DPB4 484 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 ItgadQ3V0T4 1168 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 FAM120AQ6A0A9 1112 aaKnown RBP17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Aldh5a1Q8BWF0 523 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 PmpcbQ9CXT8 489 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 PygmQ9WUB3 842 aaKnown RBP17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Oip5A2AQ14 241 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Serpina3kP07759 418 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 OsbpQ3B7Z2 805 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 PoliQ6R3M4 717 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Znf598Q80YR4 908 aaKnown RBP17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Tesk2Q8VCT9 570 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Oas1dQ8VI95 361 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Ten1Q9D7K2 161 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 NvlQ9DBY8 855 aaKnown RBP17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Tjp2Q9Z0U1 1167 aaKnown RBP17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 A0A1Y7VP24 259 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Flvcr1B2RXV4 560 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Fam198aQ3UY90 562 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Mief2Q5NCS9 454 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Ccdc40Q8BI79 1192 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Clca1Q9D7Z6 913 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Psmd12Q9D8W5 456 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Dcun1d1Q9QZ73 259 aa17.31■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Krt28A6BLY7 462 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Ace3D0G895 737 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Sec22bO08547 215 aaKnown RBP17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Krt4P07744 525 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Clcn3P51791 818 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Fastkd1Q6DI86 829 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Ssxb5Q6XAS2 159 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Med21Q9CQ39 144 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Prpf4Q9DAW6 521 aaKnown RBP17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 FignQ9ERZ6 759 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 CluhQ5SW19 1315 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Crabp2P22935 138 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Msr1P30204 458 aaKnown RBP17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Fam8a1Q3URQ4 399 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Olfr670Q7TRP3 312 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Il31raQ8K5B1 716 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Trmt11Q9CWH5 460 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Inpp4aQ9EPW0 939 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 MkksQ9JI70 570 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Zcchc11B2RX14 1644 aaKnown RBP17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 AlbP07724 608 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Nkx2-5P42582 318 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 TdgP56581 421 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Rufy4Q3TYX8 563 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Orc2Q60862 576 aaKnown RBP17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Fam120bQ6RI63 786 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Sp8Q8BMJ8 486 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Gtse1Q8R080 741 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Sgms1Q8VCQ6 419 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Ndc80Q9D0F1 642 aaKnown RBP17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Lrrc46Q9DAP0 323 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Aff4Q9ESC8 1160 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 1810065E05RikQ5NC41 235 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Q8BP99 230 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Efl1Q8C0D5 1127 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 PnkpQ9JLV6 522 aaKnown RBP17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Actl7aQ9QY84 440 aa17.3■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 JcadQ5DTX6 1320 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Zscan4-ps1A0A1C7CYV3 506 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Zscan4dA7KBS4 506 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Odc1P00860 461 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Casp4P70343 373 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Zscan4fQ3URS2 506 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Ddx3xQ62167 662 aaKnown RBP17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Tbc1d12Q6A039 696 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Pip5kl1Q6U7H8 395 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Zscan4cQ80VJ6 506 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 SpidrQ8BGX7 933 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 MtrrQ8C1A3 696 aa17.29■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms