RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Oma1Q9D8H7 521 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Zscan4-ps3A0A1B0GRH6 506 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Zscan4-ps2A0A1C7CYU6 506 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Arhgef26D3YYY8 869 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gm4307E9PZY4 289 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gm4312K9J7E2 289 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Hk2O08528 917 aaKnown RBP10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Myl4P09541 193 aaKnown RBP10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 NfibP97863 570 aaKnown RBP10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 VcpQ01853 806 aaKnown RBP10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Dlgap3Q6PFD5 977 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ap1s3Q7TN05 154 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Nsun6Q7TS68 476 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Znf618Q80YY7 953 aaKnown RBP10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Usp20Q8C6M1 916 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 WaslQ91YD9 501 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Hnrnph3D3Z3N4 346 aaKnown RBP10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 P01734 135 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Msh3P13705 1091 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Cab39Q06138 341 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Grid2ipQ0QWG9 1203 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Nr1h2Q60644 446 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Armcx2Q6A058 784 aaKnown RBP10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Olfr301Q7TS04 311 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Scn3bQ8BHK2 215 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ddx18Q8K363 660 aaKnown RBP10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Zbtb44Q8R0A2 453 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Creld1Q91XD7 420 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Thg1lQ9CY52 298 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gdap2Q9DBL2 498 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Stk4Q9JI11 487 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Scd1P13516 355 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 HalP35492 657 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Cdca2Q14B71 982 aaKnown RBP10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Zc3h15Q3TIV5 426 aaKnown RBP10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Tnfaip2Q61333 691 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Sgsm1Q8BPQ7 1093 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 PygbQ8CI94 843 aaKnown RBP10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Kiaa2013Q91X21 634 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Mtmr4Q91XS1 1190 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 MmadhcQ99LS1 296 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Mrpl57Q9CQF8 102 aaKnown RBP10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Etnk1Q9D4V0 363 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ifi30Q9ESY9 248 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Myo19Q5SV80 963 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Far2Q7TNT2 515 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ece2Q80Z60 881 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Pdk1Q8BFP9 434 aaKnown RBP10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Coq6Q8R1S0 476 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gtf2a1lQ8R4I4 468 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Sugt1Q9CX34 336 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 SynrgQ5SV85 1306 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Zmym2Q9CU65 1376 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Zfp984A2A7A2 547 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gm8922F6XVS9 199 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 RargP18911 458 aaKnown RBP10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Rbm44Q3V089 1013 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ripor1Q68FE6 1223 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Bsdc1Q80Y55 427 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Prkaa2Q8BRK8 552 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Alas1Q8VC19 642 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Lars2Q8VDC0 902 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Abcb11Q9QY30 1321 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Zfp626A0A0U1RQ84 676 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Dhx35A2ACQ1 703 aaKnown RBP10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Kpna7C0LLJ0 499 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Spin2fJ3QPU0 254 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Fbln2P37889 1221 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Tbc1d10aP58802 500 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Asprv1Q09PK2 339 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Dok7Q18PE0 504 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Slc2a13Q3UHK1 637 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Tfcp2l1Q3UNW5 479 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Rhox12Q4TU81 186 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Dmc1Q61880 340 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Hecw2Q6I6G8 1578 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Tecpr2Q3UH45 1423 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Zc3h7bF8VPP8 982 aaKnown RBP10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Fkbp1aP26883 108 aaKnown RBP10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Cyp19a1P28649 503 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Shcbp1lQ3TTP0 639 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Rcsd1Q3UZA1 412 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Slc13a5Q67BT3 572 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Casc4Q6P2L7 435 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Supt20hQ7TT00 530 aaKnown RBP10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Sel1l3Q80TS8 1137 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Rab14Q91V41 215 aaKnown RBP10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Polr3fQ921X6 316 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Satl1Q9D5N8 744 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Foxo4Q9WVH3 505 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Rit2P70425 217 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Myo1dQ5SYD0 1006 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 NrcamQ810U4 1256 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Zfp446Q8C9M8 523 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Q9CYI0 393 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gtf3c6Q9D8P7 227 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gm2832F7AEC7 200 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Cdo1P60334 200 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Q5EBG8 199 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ddx5Q61656 614 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 44.4 ms